Detail information of GWHGAAZE018120


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002280532.11.8222E-115PREDICTED: probable glutathione S-transferase [Vitis vinifera]
Swissprottr|P32110|GSTX6_SOYBN5E-74Probable glutathione S-transferase
trEMBLtr|F6GTS9|F6GTS9_VITVI7E-116Putative uncharacterized protein {ECO:0000313|EMBL:CCB43253.1}
TAIR10AT2G29420.12E-55glutathione S-transferase tau 7

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1541716615418559-
GWHAAZE00000005mRNA1541716615418559-
GWHAAZE00000005exon1541716615417534-
GWHAAZE00000005exon1541825115418559-
GWHAAZE00000005CDS1541825115418559-
GWHAAZE00000005CDS1541716615417534-
Transcript Sequence

Network for GWHGAAZE018120

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02798.21GST_N5751.20E-16
PF00043.26GST_C1111900.00035
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00799GST, gst Metabolic pathways map01100
Glutathione metabolismmap00480
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Drug metabolism - other enzymesmap00983
Longevity regulating pathway - wormmap04212

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.763
SRR3591706second leaf2.108
SRR3591707mature leaf6.609
SRR3591708Shoot apex2.890
SRR3591709Stem4.504
SRR3591710White floral bud5.949
SRR3591711White flower18.027
SRR3591712Green floral bud3.355
SRR3591713Yellow flower43.804
SRP173429 SRR8316895Juvenile bud stage 3.875
SRR8316896Juvenile bud stage 6.740
SRR8316897Juvenile bud stage 1.791
SRR8316894Third green stage 1.578
SRR8316900Third green stage 2.627
SRR8316901Third green stage 3.985
SRR8316898Complete white stage 1.889
SRR8316899Complete white stage 5.651
SRR8316903Complete white stage 3.142
SRR8316902Silver flowering stage3.398
SRR8316904Silver flowering stage3.576
SRR8316905Silver flowering stage1.901
SRR8316906Gold flowering stage 19.776
SRR8316907Gold flowering stage 16.618
SRR8316908Gold flowering stage 44.802
SRP132670SRR6706286Control7.575
SRR6706287Light intensity 50%5.310
SRR6706288Light intensity 20%4.529
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.381
CNS0095593Slightly white alabastrum(diploid) 24.610
CNS0095594Slightly white alabastrum(diploid) 38.908
CNS0095595Whole white alabastrum(diploid) 23.542
CNS0095596Whole white alabastrum(diploid) 32.821
CNS0095597Whole white alabastrum(diploid) 42.078
CNS0095598Silvery flower (diploied) 17.489
CNS0095599Silvery flower (diploied) 27.153
CNS0095600Silvery flower (diploied) 33.358
CNS0095601Golden flower (diploid) 110.061
CNS0095602Golden flower (diploid) 27.540
CNS0095603Golden flower (diploid) 35.280
CNS0095604Slightly white alabastrum(tetraploid) 12.108
CNS0095605Slightly white alabastrum(tetraploid) 22.850
CNS0095606Slightly white alabastrum(tetraploid) 32.615
CNS0095607Whole white alabastrum(tetraploid) 11.540
CNS0095608Whole white alabastrum(tetraploid) 21.513
CNS0095609Whole white alabastrum(tetraploid) 31.956
CNS0095610Silvery flower (tetraploid) 15.488
CNS0095611Silvery flower (tetraploid) 22.277
CNS0095612Silvery flower (tetraploid) 32.164
CNS0095613Golden flower (tetraploid) 15.873
CNS0095614Golden flower (tetraploid) 27.069
CNS0095615Golden flower (tetraploid) 30.726
CRA001975CRR073297Stem 16.887
CRR073298Stem 24.406
CRR073299Stem 34.179
CRR073300Leaf 12.119
CRR073301Leaf 22.957
CRR073302Leaf 33.145
CRR073303Juvenile bud 11.538
CRR073304Juvenile bud 21.194
CRR073305Juvenile bud 30.985
CRR073306Third green 12.093
CRR073307Third green 21.972
CRR073308Third green 31.006
CRR073309Second white 10.847
CRR073310Second white 22.908
CRR073311Second white 32.637
CRR073312Silver flowering 17.696
CRR073313Silver flowering 25.529
CRR073314Silver flowering 35.150
CRR073315Gold flowering 19.586
CRR073316Gold flowering 216.429
CRR073317Gold flowering 38.330
CRR073318Tawny withering 135.025
CRR073319Tawny withering 270.354
CRR073320Tawny withering 312.176