Detail information of GWHGAAZE018150


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCAN59842.11.49241E-16hypothetical protein VITISV_030358 [Vitis vinifera]
trEMBLtr|W9RTE5|W9RTE5_9ROSA2E-17WUSCHEL-related homeobox 1 {ECO:0000313|EMBL:EXB69100.1}

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1571207815712494-
GWHAAZE00000005mRNA1571207815712494-
GWHAAZE00000005exon1571207815712494-
GWHAAZE00000005CDS1571207815712494-
Transcript Sequence

Network for GWHGAAZE018150

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0266


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf1.094
SRR3591707mature leaf0.000
SRR3591708Shoot apex3.826
SRR3591709Stem0.088
SRR3591710White floral bud0.238
SRR3591711White flower0.000
SRR3591712Green floral bud0.000
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.785
SRR8316896Juvenile bud stage 0.422
SRR8316897Juvenile bud stage 0.078
SRR8316894Third green stage 0.522
SRR8316900Third green stage 0.000
SRR8316901Third green stage 0.000
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.608
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.140
SRR6706287Light intensity 50%0.171
SRR6706288Light intensity 20%0.155
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.000
CNS0095593Slightly white alabastrum(diploid) 21.646
CNS0095594Slightly white alabastrum(diploid) 31.651
CNS0095595Whole white alabastrum(diploid) 20.151
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 40.055
CNS0095598Silvery flower (diploied) 13.775
CNS0095599Silvery flower (diploied) 22.992
CNS0095600Silvery flower (diploied) 30.098
CNS0095601Golden flower (diploid) 12.337
CNS0095602Golden flower (diploid) 20.856
CNS0095603Golden flower (diploid) 30.977
CNS0095604Slightly white alabastrum(tetraploid) 10.196
CNS0095605Slightly white alabastrum(tetraploid) 20.837
CNS0095606Slightly white alabastrum(tetraploid) 31.050
CNS0095607Whole white alabastrum(tetraploid) 10.368
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.162
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.210
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.910
CRR073298Stem 20.190
CRR073299Stem 30.026
CRR073300Leaf 10.330
CRR073301Leaf 20.385
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.095
CRR073308Third green 30.013
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000