Detail information of GWHGAAZE018163


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011073000.10PREDICTED: aldose 1-epimerase [Sesamum indicum]
trEMBLtr|A0A059D0W3|A0A059D0W3_EUCGR0Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}
TAIR10AT3G17940.11E-151Galactose mutarotase-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1588580015888465-
GWHAAZE00000005mRNA1588580015888465-
GWHAAZE00000005exon1588580015886422-
GWHAAZE00000005exon1588650215886606-
GWHAAZE00000005exon1588791015888036-
GWHAAZE00000005exon1588821415888263-
GWHAAZE00000005exon1588835415888465-
GWHAAZE00000005CDS1588835415888465-
GWHAAZE00000005CDS1588821415888263-
GWHAAZE00000005CDS1588791015888036-
GWHAAZE00000005CDS1588650215886606-
GWHAAZE00000005CDS1588580015886422-
Transcript Sequence

Network for GWHGAAZE018163

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01263.21Aldose_epim103331.40E-97
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01785galM, GALM Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Glycolysis / Gluconeogenesismap00010
Galactose metabolismmap00052

Gene Ontology

GO term OntologyName
GO:0005975biological_processcarbohydrate metabolic process
GO:0019318biological_processhexose metabolic process
GO:0016853molecular_functionisomerase activity
GO:0003824molecular_functioncatalytic activity
GO:0030246molecular_functioncarbohydrate binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf113.413
SRR3591706second leaf49.390
SRR3591707mature leaf45.183
SRR3591708Shoot apex74.738
SRR3591709Stem126.719
SRR3591710White floral bud142.687
SRR3591711White flower150.086
SRR3591712Green floral bud135.084
SRR3591713Yellow flower160.554
SRP173429 SRR8316895Juvenile bud stage 108.177
SRR8316896Juvenile bud stage 149.810
SRR8316897Juvenile bud stage 69.455
SRR8316894Third green stage 46.148
SRR8316900Third green stage 131.854
SRR8316901Third green stage 136.724
SRR8316898Complete white stage 54.788
SRR8316899Complete white stage 120.059
SRR8316903Complete white stage 78.938
SRR8316902Silver flowering stage49.255
SRR8316904Silver flowering stage62.418
SRR8316905Silver flowering stage28.740
SRR8316906Gold flowering stage 97.265
SRR8316907Gold flowering stage 116.621
SRR8316908Gold flowering stage 120.013
SRP132670SRR6706286Control144.235
SRR6706287Light intensity 50%147.866
SRR6706288Light intensity 20%153.690
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1159.637
CNS0095593Slightly white alabastrum(diploid) 2142.415
CNS0095594Slightly white alabastrum(diploid) 3182.557
CNS0095595Whole white alabastrum(diploid) 2137.607
CNS0095596Whole white alabastrum(diploid) 3143.817
CNS0095597Whole white alabastrum(diploid) 4145.382
CNS0095598Silvery flower (diploied) 1135.236
CNS0095599Silvery flower (diploied) 2136.789
CNS0095600Silvery flower (diploied) 3189.066
CNS0095601Golden flower (diploid) 1119.812
CNS0095602Golden flower (diploid) 2154.545
CNS0095603Golden flower (diploid) 3149.532
CNS0095604Slightly white alabastrum(tetraploid) 1156.300
CNS0095605Slightly white alabastrum(tetraploid) 2156.800
CNS0095606Slightly white alabastrum(tetraploid) 3129.423
CNS0095607Whole white alabastrum(tetraploid) 1131.840
CNS0095608Whole white alabastrum(tetraploid) 2118.635
CNS0095609Whole white alabastrum(tetraploid) 3132.485
CNS0095610Silvery flower (tetraploid) 1152.638
CNS0095611Silvery flower (tetraploid) 2168.681
CNS0095612Silvery flower (tetraploid) 3157.116
CNS0095613Golden flower (tetraploid) 1140.616
CNS0095614Golden flower (tetraploid) 2153.289
CNS0095615Golden flower (tetraploid) 3130.561
CRA001975CRR073297Stem 1161.142
CRR073298Stem 2148.548
CRR073299Stem 3221.949
CRR073300Leaf 1132.231
CRR073301Leaf 2148.592
CRR073302Leaf 3181.897
CRR073303Juvenile bud 1192.482
CRR073304Juvenile bud 2141.735
CRR073305Juvenile bud 3184.123
CRR073306Third green 1111.504
CRR073307Third green 2131.980
CRR073308Third green 3107.070
CRR073309Second white 1182.256
CRR073310Second white 2120.906
CRR073311Second white 3103.683
CRR073312Silver flowering 1117.396
CRR073313Silver flowering 2133.379
CRR073314Silver flowering 3104.436
CRR073315Gold flowering 180.545
CRR073316Gold flowering 278.144
CRR073317Gold flowering 378.580
CRR073318Tawny withering 1146.250
CRR073319Tawny withering 2151.788
CRR073320Tawny withering 3150.177