Detail information of GWHGAAZE018181


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004299508.14.00146E-62PREDICTED: mitogen-activated protein kinase kinase 5-like [Fragaria vesca subsp. vesca]
Swissprottr|Q9LPQ3|M2K7_ARATH1E-50Mitogen-activated protein kinase kinase 7
trEMBLtr|W9QZB3|W9QZB3_9ROSA2E-62Mitogen-activated protein kinase kinase 4 {ECO:0000313|EMBL:EXB45111.1}
TAIR10AT1G18350.15E-42MAP kinase kinase 7

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1626875416269113-
GWHAAZE00000005mRNA1626875416269113-
GWHAAZE00000005exon1626875416269113-
GWHAAZE00000005CDS1626875416269113-
Transcript Sequence

Network for GWHGAAZE018181

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase111101.20E-14
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilySTE_STE7

KEGG pathway

KO Enzyme pathway mapID
K20604MKK9 MAPK signaling pathway - plant map04016

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE018181.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 3020406080100120140160180Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf38.101
SRR3591706second leaf40.987
SRR3591707mature leaf44.454
SRR3591708Shoot apex44.625
SRR3591709Stem53.984
SRR3591710White floral bud35.561
SRR3591711White flower67.836
SRR3591712Green floral bud30.956
SRR3591713Yellow flower67.286
SRP173429 SRR8316895Juvenile bud stage 23.285
SRR8316896Juvenile bud stage 27.410
SRR8316897Juvenile bud stage 19.225
SRR8316894Third green stage 9.919
SRR8316900Third green stage 17.555
SRR8316901Third green stage 25.306
SRR8316898Complete white stage 1.620
SRR8316899Complete white stage 27.670
SRR8316903Complete white stage 3.776
SRR8316902Silver flowering stage7.478
SRR8316904Silver flowering stage6.812
SRR8316905Silver flowering stage9.159
SRR8316906Gold flowering stage 20.492
SRR8316907Gold flowering stage 23.445
SRR8316908Gold flowering stage 15.504
SRP132670SRR6706286Control24.718
SRR6706287Light intensity 50%27.441
SRR6706288Light intensity 20%27.777
CNP0000432CNS0095592Slightly white alabastrum(diploid) 136.123
CNS0095593Slightly white alabastrum(diploid) 229.837
CNS0095594Slightly white alabastrum(diploid) 352.329
CNS0095595Whole white alabastrum(diploid) 217.716
CNS0095596Whole white alabastrum(diploid) 313.529
CNS0095597Whole white alabastrum(diploid) 421.476
CNS0095598Silvery flower (diploied) 155.916
CNS0095599Silvery flower (diploied) 243.081
CNS0095600Silvery flower (diploied) 331.660
CNS0095601Golden flower (diploid) 180.238
CNS0095602Golden flower (diploid) 238.382
CNS0095603Golden flower (diploid) 340.265
CNS0095604Slightly white alabastrum(tetraploid) 116.884
CNS0095605Slightly white alabastrum(tetraploid) 218.259
CNS0095606Slightly white alabastrum(tetraploid) 321.013
CNS0095607Whole white alabastrum(tetraploid) 113.152
CNS0095608Whole white alabastrum(tetraploid) 213.181
CNS0095609Whole white alabastrum(tetraploid) 333.852
CNS0095610Silvery flower (tetraploid) 128.850
CNS0095611Silvery flower (tetraploid) 225.911
CNS0095612Silvery flower (tetraploid) 326.619
CNS0095613Golden flower (tetraploid) 124.755
CNS0095614Golden flower (tetraploid) 220.643
CNS0095615Golden flower (tetraploid) 312.177
CRA001975CRR073297Stem 126.914
CRR073298Stem 240.419
CRR073299Stem 350.947
CRR073300Leaf 160.022
CRR073301Leaf 243.565
CRR073302Leaf 351.564
CRR073303Juvenile bud 138.076
CRR073304Juvenile bud 236.851
CRR073305Juvenile bud 349.732
CRR073306Third green 15.761
CRR073307Third green 29.302
CRR073308Third green 38.095
CRR073309Second white 13.778
CRR073310Second white 26.214
CRR073311Second white 35.261
CRR073312Silver flowering 15.820
CRR073313Silver flowering 26.324
CRR073314Silver flowering 33.262
CRR073315Gold flowering 1107.935
CRR073316Gold flowering 2123.405
CRR073317Gold flowering 3167.558
CRR073318Tawny withering 161.074
CRR073319Tawny withering 274.716
CRR073320Tawny withering 375.192