Detail information of GWHGAAZE018248


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004290084.13.31614E-69PREDICTED: aminoacylase-1-like [Fragaria vesca subsp. vesca]
trEMBLtr|B9HPM8|B9HPM8_POPTR4E-69Aminoacylase-1 {ECO:0000256|PIRNR:PIRNR036696}
TAIR10AT4G38220.12E-54Peptidase M20/M25/M40 family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1708138717081800+
GWHAAZE00000005mRNA1708138717081800+
GWHAAZE00000005exon1708138717081800+
GWHAAZE00000005CDS1708138717081800+
Transcript Sequence

Network for GWHGAAZE018248

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01546.29Peptidase_M201551.90E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14677ACY1 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
2-Oxocarboxylic acid metabolismmap01210
Biosynthesis of amino acidsmap01230
Arginine biosynthesismap00220

Gene Ontology

GO term OntologyName
GO:0016787molecular_functionhydrolase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.110
SRR3591707mature leaf0.119
SRR3591708Shoot apex0.774
SRR3591709Stem0.223
SRR3591710White floral bud0.421
SRR3591711White flower0.202
SRR3591712Green floral bud0.507
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.000
SRR8316896Juvenile bud stage 0.086
SRR8316897Juvenile bud stage 0.131
SRR8316894Third green stage 0.000
SRR8316900Third green stage 0.566
SRR8316901Third green stage 0.000
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.100
SRR8316903Complete white stage 0.016
SRR8316902Silver flowering stage0.082
SRR8316904Silver flowering stage0.505
SRR8316905Silver flowering stage0.041
SRR8316906Gold flowering stage 0.349
SRR8316907Gold flowering stage 0.019
SRR8316908Gold flowering stage 0.129
SRP132670SRR6706286Control0.377
SRR6706287Light intensity 50%0.628
SRR6706288Light intensity 20%0.047
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.084
CNS0095593Slightly white alabastrum(diploid) 20.701
CNS0095594Slightly white alabastrum(diploid) 30.754
CNS0095595Whole white alabastrum(diploid) 20.717
CNS0095596Whole white alabastrum(diploid) 31.332
CNS0095597Whole white alabastrum(diploid) 41.727
CNS0095598Silvery flower (diploied) 10.036
CNS0095599Silvery flower (diploied) 20.023
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.161
CNS0095603Golden flower (diploid) 30.321
CNS0095604Slightly white alabastrum(tetraploid) 10.175
CNS0095605Slightly white alabastrum(tetraploid) 20.129
CNS0095606Slightly white alabastrum(tetraploid) 30.142
CNS0095607Whole white alabastrum(tetraploid) 10.323
CNS0095608Whole white alabastrum(tetraploid) 20.516
CNS0095609Whole white alabastrum(tetraploid) 30.202
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.054
CNS0095612Silvery flower (tetraploid) 30.092
CNS0095613Golden flower (tetraploid) 10.045
CNS0095614Golden flower (tetraploid) 20.128
CNS0095615Golden flower (tetraploid) 30.006
CRA001975CRR073297Stem 10.512
CRR073298Stem 20.716
CRR073299Stem 30.739
CRR073300Leaf 10.397
CRR073301Leaf 21.056
CRR073302Leaf 30.105
CRR073303Juvenile bud 10.028
CRR073304Juvenile bud 20.055
CRR073305Juvenile bud 30.052
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.015
CRR073309Second white 10.000
CRR073310Second white 20.024
CRR073311Second white 30.459
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.152
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.835
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000