Detail information of GWHGAAZE018316


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002533188.12.9712E-90phosphatidylinositol synthase, putative [Ricinus communis]
Swissprottr|Q8LBA6|PIS1_ARATH1E-85CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1
trEMBLtr|B9T4L9|B9T4L9_RICCO1E-90Phosphatidylinositol synthase, putative {ECO:0000313|EMBL:EEF29194.1}
TAIR10AT4G38570.12E-67probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1786536217867392-
GWHAAZE00000005mRNA1786536217867392-
GWHAAZE00000005exon1786536217865424-
GWHAAZE00000005exon1786584117865939-
GWHAAZE00000005exon1786604517866101-
GWHAAZE00000005exon1786618817866302-
GWHAAZE00000005exon1786647517866540-
GWHAAZE00000005exon1786663017866674-
GWHAAZE00000005exon1786676517866804-
GWHAAZE00000005exon1786737417867392-
GWHAAZE00000005CDS1786737417867392-
GWHAAZE00000005CDS1786676517866804-
GWHAAZE00000005CDS1786663017866674-
GWHAAZE00000005CDS1786647517866540-
GWHAAZE00000005CDS1786618817866302-
GWHAAZE00000005CDS1786604517866101-
GWHAAZE00000005CDS1786584117865939-
GWHAAZE00000005CDS1786536217865424-
Transcript Sequence

Network for GWHGAAZE018316

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00999CDIPT Metabolic pathways map01100
Inositol phosphate metabolismmap00562
Glycerophospholipid metabolismmap00564
Phosphatidylinositol signaling systemmap04070

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf57.334
SRR3591706second leaf25.514
SRR3591707mature leaf26.911
SRR3591708Shoot apex40.497
SRR3591709Stem52.970
SRR3591710White floral bud28.296
SRR3591711White flower24.621
SRR3591712Green floral bud40.542
SRR3591713Yellow flower24.382
SRP173429 SRR8316895Juvenile bud stage 26.658
SRR8316896Juvenile bud stage 39.376
SRR8316897Juvenile bud stage 17.002
SRR8316894Third green stage 18.474
SRR8316900Third green stage 41.853
SRR8316901Third green stage 44.611
SRR8316898Complete white stage 9.213
SRR8316899Complete white stage 39.959
SRR8316903Complete white stage 15.530
SRR8316902Silver flowering stage12.014
SRR8316904Silver flowering stage17.197
SRR8316905Silver flowering stage9.588
SRR8316906Gold flowering stage 33.053
SRR8316907Gold flowering stage 28.680
SRR8316908Gold flowering stage 31.332
SRP132670SRR6706286Control16.353
SRR6706287Light intensity 50%17.405
SRR6706288Light intensity 20%20.481
CNP0000432CNS0095592Slightly white alabastrum(diploid) 138.603
CNS0095593Slightly white alabastrum(diploid) 240.470
CNS0095594Slightly white alabastrum(diploid) 344.766
CNS0095595Whole white alabastrum(diploid) 236.247
CNS0095596Whole white alabastrum(diploid) 341.713
CNS0095597Whole white alabastrum(diploid) 435.814
CNS0095598Silvery flower (diploied) 126.116
CNS0095599Silvery flower (diploied) 222.008
CNS0095600Silvery flower (diploied) 320.948
CNS0095601Golden flower (diploid) 114.266
CNS0095602Golden flower (diploid) 219.521
CNS0095603Golden flower (diploid) 316.798
CNS0095604Slightly white alabastrum(tetraploid) 155.167
CNS0095605Slightly white alabastrum(tetraploid) 251.828
CNS0095606Slightly white alabastrum(tetraploid) 342.129
CNS0095607Whole white alabastrum(tetraploid) 140.575
CNS0095608Whole white alabastrum(tetraploid) 238.264
CNS0095609Whole white alabastrum(tetraploid) 338.847
CNS0095610Silvery flower (tetraploid) 126.192
CNS0095611Silvery flower (tetraploid) 223.496
CNS0095612Silvery flower (tetraploid) 327.419
CNS0095613Golden flower (tetraploid) 115.199
CNS0095614Golden flower (tetraploid) 223.083
CNS0095615Golden flower (tetraploid) 315.196
CRA001975CRR073297Stem 117.325
CRR073298Stem 220.212
CRR073299Stem 311.088
CRR073300Leaf 122.222
CRR073301Leaf 219.020
CRR073302Leaf 316.777
CRR073303Juvenile bud 113.319
CRR073304Juvenile bud 210.677
CRR073305Juvenile bud 322.499
CRR073306Third green 16.987
CRR073307Third green 29.009
CRR073308Third green 36.358
CRR073309Second white 119.503
CRR073310Second white 214.797
CRR073311Second white 319.493
CRR073312Silver flowering 118.212
CRR073313Silver flowering 210.211
CRR073314Silver flowering 312.390
CRR073315Gold flowering 16.294
CRR073316Gold flowering 212.833
CRR073317Gold flowering 38.889
CRR073318Tawny withering 125.063
CRR073319Tawny withering 223.270
CRR073320Tawny withering 323.470