Detail information of GWHGAAZE018326


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007199673.10hypothetical protein PRUPE_ppa000080mg [Prunus persica]
Swissprottr|Q6WWW4|UPL3_ARATH0E3 ubiquitin-protein ligase UPL3
trEMBLtr|M5VIL0|M5VIL0_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ00872.1}
TAIR10AT4G38600.10HEAT repeat ;HECT-domain (ubiquitin-transferase)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1796474317976693-
GWHAAZE00000005mRNA1796474317976693-
GWHAAZE00000005exon1797585117976693-
GWHAAZE00000005exon1797530717975417-
GWHAAZE00000005exon1797511117975227-
GWHAAZE00000005exon1797480017974970-
GWHAAZE00000005exon1797456517974726-
GWHAAZE00000005exon1797410217974350-
GWHAAZE00000005exon1797389717974018-
GWHAAZE00000005exon1797235417973800-
GWHAAZE00000005exon1796815117969734-
GWHAAZE00000005exon1796781317968043-
GWHAAZE00000005exon1796761917967723-
GWHAAZE00000005exon1796620817966288-
GWHAAZE00000005exon1796603717966105-
GWHAAZE00000005exon1796577717965905-
GWHAAZE00000005exon1796554517965667-
GWHAAZE00000005exon1796519017965409-
GWHAAZE00000005exon1796474317964998-
GWHAAZE00000005CDS1797585117976693-
GWHAAZE00000005CDS1797530717975417-
GWHAAZE00000005CDS1797511117975227-
GWHAAZE00000005CDS1797480017974970-
GWHAAZE00000005CDS1797456517974726-
GWHAAZE00000005CDS1797410217974350-
GWHAAZE00000005CDS1797389717974018-
GWHAAZE00000005CDS1797235417973800-
GWHAAZE00000005CDS1796815117969734-
GWHAAZE00000005CDS1796781317968043-
GWHAAZE00000005CDS1796761917967723-
GWHAAZE00000005CDS1796620817966288-
GWHAAZE00000005CDS1796603717966105-
GWHAAZE00000005CDS1796577717965905-
GWHAAZE00000005CDS1796554517965667-
GWHAAZE00000005CDS1796534417965409-
GWHAAZE00000005three_prime_UTR1796519017965343-
GWHAAZE00000005three_prime_UTR1796474317964998-
Transcript Sequence

Network for GWHGAAZE018326

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00632.26HECT153618691.50E-80
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyHECT

KEGG pathway

KO Enzyme pathway mapID
K10590TRIP12 Ubiquitin mediated proteolysis map04120

Gene Ontology

GO term OntologyName
GO:0004842molecular_functionubiquitin-protein transferase activity
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf54.593
SRR3591706second leaf25.186
SRR3591707mature leaf41.790
SRR3591708Shoot apex35.550
SRR3591709Stem60.499
SRR3591710White floral bud61.701
SRR3591711White flower68.791
SRR3591712Green floral bud46.955
SRR3591713Yellow flower54.306
SRP173429 SRR8316895Juvenile bud stage 28.877
SRR8316896Juvenile bud stage 42.960
SRR8316897Juvenile bud stage 17.741
SRR8316894Third green stage 18.773
SRR8316900Third green stage 36.197
SRR8316901Third green stage 37.225
SRR8316898Complete white stage 11.964
SRR8316899Complete white stage 37.230
SRR8316903Complete white stage 35.002
SRR8316902Silver flowering stage21.242
SRR8316904Silver flowering stage35.784
SRR8316905Silver flowering stage16.052
SRR8316906Gold flowering stage 50.715
SRR8316907Gold flowering stage 53.734
SRR8316908Gold flowering stage 55.536
SRP132670SRR6706286Control44.071
SRR6706287Light intensity 50%47.067
SRR6706288Light intensity 20%48.321
CNP0000432CNS0095592Slightly white alabastrum(diploid) 124.759
CNS0095593Slightly white alabastrum(diploid) 221.171
CNS0095594Slightly white alabastrum(diploid) 324.488
CNS0095595Whole white alabastrum(diploid) 223.722
CNS0095596Whole white alabastrum(diploid) 320.237
CNS0095597Whole white alabastrum(diploid) 425.336
CNS0095598Silvery flower (diploied) 127.726
CNS0095599Silvery flower (diploied) 225.253
CNS0095600Silvery flower (diploied) 359.473
CNS0095601Golden flower (diploid) 125.590
CNS0095602Golden flower (diploid) 255.828
CNS0095603Golden flower (diploid) 356.387
CNS0095604Slightly white alabastrum(tetraploid) 129.318
CNS0095605Slightly white alabastrum(tetraploid) 224.431
CNS0095606Slightly white alabastrum(tetraploid) 343.631
CNS0095607Whole white alabastrum(tetraploid) 123.825
CNS0095608Whole white alabastrum(tetraploid) 221.562
CNS0095609Whole white alabastrum(tetraploid) 339.006
CNS0095610Silvery flower (tetraploid) 165.543
CNS0095611Silvery flower (tetraploid) 260.129
CNS0095612Silvery flower (tetraploid) 357.504
CNS0095613Golden flower (tetraploid) 130.660
CNS0095614Golden flower (tetraploid) 249.693
CNS0095615Golden flower (tetraploid) 361.499
CRA001975CRR073297Stem 144.357
CRR073298Stem 242.230
CRR073299Stem 335.235
CRR073300Leaf 145.661
CRR073301Leaf 236.927
CRR073302Leaf 327.256
CRR073303Juvenile bud 132.350
CRR073304Juvenile bud 221.349
CRR073305Juvenile bud 350.123
CRR073306Third green 128.013
CRR073307Third green 216.775
CRR073308Third green 329.511
CRR073309Second white 122.587
CRR073310Second white 230.000
CRR073311Second white 338.451
CRR073312Silver flowering 138.785
CRR073313Silver flowering 241.996
CRR073314Silver flowering 335.598
CRR073315Gold flowering 113.664
CRR073316Gold flowering 228.329
CRR073317Gold flowering 319.952
CRR073318Tawny withering 134.084
CRR073319Tawny withering 229.655
CRR073320Tawny withering 329.736