Detail information of GWHGAAZE018331


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrACH87168.10senescence-related protein [Camellia sinensis]
trEMBLtr|B5TV63|B5TV63_CAMSI0Senescence-related protein {ECO:0000313|EMBL:ACH87168.1}
TAIR10AT2G17840.14E-126Senescence/dehydration-associated protein-related

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1809461618097196-
GWHAAZE00000005mRNA1809461618097196-
GWHAAZE00000005exon1809461618094727-
GWHAAZE00000005exon1809501818095102-
GWHAAZE00000005exon1809541318095579-
GWHAAZE00000005exon1809633718097196-
GWHAAZE00000005CDS1809633718097196-
GWHAAZE00000005CDS1809541318095579-
GWHAAZE00000005CDS1809501818095102-
GWHAAZE00000005CDS1809461618094727-
Transcript Sequence

Network for GWHGAAZE018331

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06911.13Senescence2364031.70E-44
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K19366SPG20 Endocytosis map04144

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf56.530
SRR3591706second leaf20.451
SRR3591707mature leaf21.627
SRR3591708Shoot apex26.041
SRR3591709Stem39.532
SRR3591710White floral bud22.715
SRR3591711White flower28.274
SRR3591712Green floral bud20.244
SRR3591713Yellow flower16.183
SRP173429 SRR8316895Juvenile bud stage 19.642
SRR8316896Juvenile bud stage 26.584
SRR8316897Juvenile bud stage 17.088
SRR8316894Third green stage 6.890
SRR8316900Third green stage 20.672
SRR8316901Third green stage 25.788
SRR8316898Complete white stage 9.480
SRR8316899Complete white stage 38.007
SRR8316903Complete white stage 12.831
SRR8316902Silver flowering stage6.958
SRR8316904Silver flowering stage9.598
SRR8316905Silver flowering stage5.237
SRR8316906Gold flowering stage 14.799
SRR8316907Gold flowering stage 13.386
SRR8316908Gold flowering stage 18.284
SRP132670SRR6706286Control26.218
SRR6706287Light intensity 50%26.663
SRR6706288Light intensity 20%28.166
CNP0000432CNS0095592Slightly white alabastrum(diploid) 125.997
CNS0095593Slightly white alabastrum(diploid) 229.914
CNS0095594Slightly white alabastrum(diploid) 327.541
CNS0095595Whole white alabastrum(diploid) 224.411
CNS0095596Whole white alabastrum(diploid) 312.052
CNS0095597Whole white alabastrum(diploid) 419.329
CNS0095598Silvery flower (diploied) 136.735
CNS0095599Silvery flower (diploied) 238.719
CNS0095600Silvery flower (diploied) 330.071
CNS0095601Golden flower (diploid) 135.094
CNS0095602Golden flower (diploid) 237.627
CNS0095603Golden flower (diploid) 334.851
CNS0095604Slightly white alabastrum(tetraploid) 114.041
CNS0095605Slightly white alabastrum(tetraploid) 213.973
CNS0095606Slightly white alabastrum(tetraploid) 327.104
CNS0095607Whole white alabastrum(tetraploid) 110.068
CNS0095608Whole white alabastrum(tetraploid) 211.334
CNS0095609Whole white alabastrum(tetraploid) 321.839
CNS0095610Silvery flower (tetraploid) 130.428
CNS0095611Silvery flower (tetraploid) 230.136
CNS0095612Silvery flower (tetraploid) 324.878
CNS0095613Golden flower (tetraploid) 118.777
CNS0095614Golden flower (tetraploid) 226.286
CNS0095615Golden flower (tetraploid) 313.890
CRA001975CRR073297Stem 119.357
CRR073298Stem 222.525
CRR073299Stem 320.829
CRR073300Leaf 126.381
CRR073301Leaf 231.537
CRR073302Leaf 318.659
CRR073303Juvenile bud 124.659
CRR073304Juvenile bud 222.309
CRR073305Juvenile bud 325.711
CRR073306Third green 111.872
CRR073307Third green 215.078
CRR073308Third green 311.672
CRR073309Second white 119.743
CRR073310Second white 215.150
CRR073311Second white 313.325
CRR073312Silver flowering 116.827
CRR073313Silver flowering 219.652
CRR073314Silver flowering 315.139
CRR073315Gold flowering 110.401
CRR073316Gold flowering 218.710
CRR073317Gold flowering 310.966
CRR073318Tawny withering 122.237
CRR073319Tawny withering 224.126
CRR073320Tawny withering 317.794