Detail information of GWHGAAZE018372


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004166277.11.54841E-41PREDICTED: auxin-induced protein X10A-like [Cucumis sativus]
Swissprottr|P32295|ARG7_VIGRR6E-27Indole-3-acetic acid-induced protein ARG7
trEMBLtr|A0A0A0LM71|A0A0A0LM71_CUCSA2E-41Uncharacterized protein {ECO:0000313|EMBL:KGN61882.1}
TAIR10AT4G38840.14E-25SAUR-like auxin-responsive protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1863925118639550-
GWHAAZE00000005mRNA1863925118639550-
GWHAAZE00000005exon1863925118639550-
GWHAAZE00000005CDS1863925118639550-
Transcript Sequence

Network for GWHGAAZE018372

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.15Auxin_inducible20957.10E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733biological_processresponse to auxin

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.765
SRR3591706second leaf0.584
SRR3591707mature leaf0.842
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud6.339
SRR3591711White flower0.301
SRR3591712Green floral bud8.246
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 1.678
SRR8316896Juvenile bud stage 2.128
SRR8316897Juvenile bud stage 0.923
SRR8316894Third green stage 3.645
SRR8316900Third green stage 30.605
SRR8316901Third green stage 21.982
SRR8316898Complete white stage 19.196
SRR8316899Complete white stage 23.402
SRR8316903Complete white stage 23.366
SRR8316902Silver flowering stage0.593
SRR8316904Silver flowering stage0.361
SRR8316905Silver flowering stage0.314
SRR8316906Gold flowering stage 0.639
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.131
SRP132670SRR6706286Control0.461
SRR6706287Light intensity 50%0.859
SRR6706288Light intensity 20%1.457
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.748
CNS0095593Slightly white alabastrum(diploid) 216.579
CNS0095594Slightly white alabastrum(diploid) 36.593
CNS0095595Whole white alabastrum(diploid) 217.956
CNS0095596Whole white alabastrum(diploid) 322.824
CNS0095597Whole white alabastrum(diploid) 419.952
CNS0095598Silvery flower (diploied) 10.577
CNS0095599Silvery flower (diploied) 20.008
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.000
CNS0095603Golden flower (diploid) 30.000
CNS0095604Slightly white alabastrum(tetraploid) 144.577
CNS0095605Slightly white alabastrum(tetraploid) 234.428
CNS0095606Slightly white alabastrum(tetraploid) 351.870
CNS0095607Whole white alabastrum(tetraploid) 131.464
CNS0095608Whole white alabastrum(tetraploid) 258.914
CNS0095609Whole white alabastrum(tetraploid) 339.503
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.519
CNS0095612Silvery flower (tetraploid) 30.066
CNS0095613Golden flower (tetraploid) 10.158
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.498
CRA001975CRR073297Stem 12.754
CRR073298Stem 22.281
CRR073299Stem 32.274
CRR073300Leaf 13.508
CRR073301Leaf 23.319
CRR073302Leaf 33.158
CRR073303Juvenile bud 15.727
CRR073304Juvenile bud 26.156
CRR073305Juvenile bud 35.823
CRR073306Third green 11.038
CRR073307Third green 20.170
CRR073308Third green 30.279
CRR073309Second white 10.000
CRR073310Second white 20.522
CRR073311Second white 30.192
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 12.870
CRR073316Gold flowering 23.799
CRR073317Gold flowering 32.379
CRR073318Tawny withering 10.788
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000