Detail information of GWHGAAZE018373


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002271427.12.05639E-46PREDICTED: auxin-induced protein 15A [Vitis vinifera]
Swissprottr|P33079|A10A5_SOYBN3E-31Auxin-induced protein 10A5
trEMBLtr|F6GX22|F6GX22_VITVI8E-47Putative uncharacterized protein {ECO:0000313|EMBL:CCB44508.1}
TAIR10AT4G34800.16E-27SAUR-like auxin-responsive protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1864351518643799-
GWHAAZE00000005mRNA1864351518643799-
GWHAAZE00000005exon1864351518643799-
GWHAAZE00000005CDS1864351518643799-
Transcript Sequence

Network for GWHGAAZE018373

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.15Auxin_inducible16878.00E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733biological_processresponse to auxin

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.018
SRR3591706second leaf6.738
SRR3591707mature leaf2.434
SRR3591708Shoot apex4.935
SRR3591709Stem2.950
SRR3591710White floral bud13.917
SRR3591711White flower8.158
SRR3591712Green floral bud8.975
SRR3591713Yellow flower1.205
SRP173429 SRR8316895Juvenile bud stage 2.498
SRR8316896Juvenile bud stage 6.365
SRR8316897Juvenile bud stage 0.513
SRR8316894Third green stage 2.986
SRR8316900Third green stage 25.669
SRR8316901Third green stage 14.413
SRR8316898Complete white stage 24.258
SRR8316899Complete white stage 15.381
SRR8316903Complete white stage 36.153
SRR8316902Silver flowering stage17.003
SRR8316904Silver flowering stage27.377
SRR8316905Silver flowering stage13.376
SRR8316906Gold flowering stage 25.951
SRR8316907Gold flowering stage 16.006
SRR8316908Gold flowering stage 16.252
SRP132670SRR6706286Control7.840
SRR6706287Light intensity 50%7.449
SRR6706288Light intensity 20%8.381
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.998
CNS0095593Slightly white alabastrum(diploid) 210.770
CNS0095594Slightly white alabastrum(diploid) 33.459
CNS0095595Whole white alabastrum(diploid) 213.527
CNS0095596Whole white alabastrum(diploid) 322.798
CNS0095597Whole white alabastrum(diploid) 414.966
CNS0095598Silvery flower (diploied) 13.662
CNS0095599Silvery flower (diploied) 25.208
CNS0095600Silvery flower (diploied) 35.447
CNS0095601Golden flower (diploid) 11.107
CNS0095602Golden flower (diploid) 21.469
CNS0095603Golden flower (diploid) 31.514
CNS0095604Slightly white alabastrum(tetraploid) 116.408
CNS0095605Slightly white alabastrum(tetraploid) 213.005
CNS0095606Slightly white alabastrum(tetraploid) 330.313
CNS0095607Whole white alabastrum(tetraploid) 116.262
CNS0095608Whole white alabastrum(tetraploid) 218.174
CNS0095609Whole white alabastrum(tetraploid) 321.588
CNS0095610Silvery flower (tetraploid) 11.241
CNS0095611Silvery flower (tetraploid) 25.635
CNS0095612Silvery flower (tetraploid) 33.678
CNS0095613Golden flower (tetraploid) 10.270
CNS0095614Golden flower (tetraploid) 21.134
CNS0095615Golden flower (tetraploid) 33.655
CRA001975CRR073297Stem 11.837
CRR073298Stem 21.903
CRR073299Stem 32.792
CRR073300Leaf 14.760
CRR073301Leaf 24.384
CRR073302Leaf 35.559
CRR073303Juvenile bud 18.883
CRR073304Juvenile bud 25.628
CRR073305Juvenile bud 33.985
CRR073306Third green 131.497
CRR073307Third green 250.719
CRR073308Third green 342.553
CRR073309Second white 139.466
CRR073310Second white 221.053
CRR073311Second white 36.520
CRR073312Silver flowering 10.215
CRR073313Silver flowering 20.370
CRR073314Silver flowering 30.173
CRR073315Gold flowering 10.686
CRR073316Gold flowering 21.063
CRR073317Gold flowering 30.440
CRR073318Tawny withering 11.145
CRR073319Tawny withering 20.142
CRR073320Tawny withering 30.018