Detail information of GWHGAAZE018378


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006423537.11.50853E-41hypothetical protein CICLE_v10029871mg [Citrus clementina]
Swissprottr|P33081|AX15A_SOYBN5E-34Auxin-induced protein 15A
trEMBLtr|V4S8K9|V4S8K9_9ROSI6E-42Uncharacterized protein {ECO:0000313|EMBL:ESR36777.1}
TAIR10AT4G38840.15E-30SAUR-like auxin-responsive protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1871994218720229+
GWHAAZE00000005mRNA1871994218720229+
GWHAAZE00000005exon1871994218720229+
GWHAAZE00000005CDS1871994218720229+
Transcript Sequence

Network for GWHGAAZE018378

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.15Auxin_inducible23926.00E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733biological_processresponse to auxin

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.322
SRR3591706second leaf4.130
SRR3591707mature leaf0.000
SRR3591708Shoot apex3.906
SRR3591709Stem0.328
SRR3591710White floral bud7.858
SRR3591711White flower12.476
SRR3591712Green floral bud7.143
SRR3591713Yellow flower0.493
SRP173429 SRR8316895Juvenile bud stage 0.865
SRR8316896Juvenile bud stage 1.659
SRR8316897Juvenile bud stage 1.875
SRR8316894Third green stage 1.441
SRR8316900Third green stage 13.225
SRR8316901Third green stage 10.681
SRR8316898Complete white stage 29.782
SRR8316899Complete white stage 5.453
SRR8316903Complete white stage 45.076
SRR8316902Silver flowering stage28.603
SRR8316904Silver flowering stage51.186
SRR8316905Silver flowering stage30.758
SRR8316906Gold flowering stage 58.462
SRR8316907Gold flowering stage 42.559
SRR8316908Gold flowering stage 24.896
SRP132670SRR6706286Control7.109
SRR6706287Light intensity 50%6.179
SRR6706288Light intensity 20%4.446
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.420
CNS0095593Slightly white alabastrum(diploid) 27.999
CNS0095594Slightly white alabastrum(diploid) 31.279
CNS0095595Whole white alabastrum(diploid) 211.122
CNS0095596Whole white alabastrum(diploid) 317.789
CNS0095597Whole white alabastrum(diploid) 48.740
CNS0095598Silvery flower (diploied) 112.627
CNS0095599Silvery flower (diploied) 228.417
CNS0095600Silvery flower (diploied) 336.484
CNS0095601Golden flower (diploid) 17.699
CNS0095602Golden flower (diploid) 213.688
CNS0095603Golden flower (diploid) 312.391
CNS0095604Slightly white alabastrum(tetraploid) 13.904
CNS0095605Slightly white alabastrum(tetraploid) 21.847
CNS0095606Slightly white alabastrum(tetraploid) 36.580
CNS0095607Whole white alabastrum(tetraploid) 13.161
CNS0095608Whole white alabastrum(tetraploid) 29.981
CNS0095609Whole white alabastrum(tetraploid) 33.104
CNS0095610Silvery flower (tetraploid) 114.873
CNS0095611Silvery flower (tetraploid) 225.553
CNS0095612Silvery flower (tetraploid) 38.033
CNS0095613Golden flower (tetraploid) 115.615
CNS0095614Golden flower (tetraploid) 25.198
CNS0095615Golden flower (tetraploid) 362.847
CRA001975CRR073297Stem 10.672
CRR073298Stem 22.639
CRR073299Stem 31.005
CRR073300Leaf 12.273
CRR073301Leaf 21.926
CRR073302Leaf 32.775
CRR073303Juvenile bud 12.819
CRR073304Juvenile bud 21.901
CRR073305Juvenile bud 31.594
CRR073306Third green 111.387
CRR073307Third green 217.325
CRR073308Third green 315.100
CRR073309Second white 13.744
CRR073310Second white 26.643
CRR073311Second white 30.871
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.340
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000