Detail information of GWHGAAZE018389


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007042001.10GLN phosphoribosyl pyrophosphate amidotransferase 1 [Theobroma cacao]
Swissprottr|Q9STG9|ASE2_ARATH0Amidophosphoribosyltransferase 2, chloroplastic (Precursor)
trEMBLtr|A0A061DZL3|A0A061DZL3_THECC0GLN phosphoribosyl pyrophosphate amidotransferase 1 {ECO:0000313|EMBL:EOX97832.1}
TAIR10AT4G34740.10GLN phosphoribosyl pyrophosphate amidotransferase 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1883382818835886+
GWHAAZE00000005mRNA1883382818835886+
GWHAAZE00000005exon1883382818834255+
GWHAAZE00000005exon1883455218835886+
GWHAAZE00000005five_prime_UTR1883382818833859+
GWHAAZE00000005CDS1883386018834255+
GWHAAZE00000005CDS1883455218835886+
Transcript Sequence

Network for GWHGAAZE018389

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13537.7GATase_71622785.30E-23
PF00156.28Pribosyltran3394501.30E-08
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00764purF, PPAT Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Purine metabolismmap00230
Alanine, aspartate and glutamate metabolismmap00250

Gene Ontology

GO term OntologyName
GO:0009113biological_processpurine nucleobase biosynthetic process
GO:0009116biological_processnucleoside metabolic process
GO:0004044molecular_functionamidophosphoribosyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf8.526
SRR3591706second leaf13.448
SRR3591707mature leaf11.215
SRR3591708Shoot apex12.843
SRR3591709Stem7.168
SRR3591710White floral bud8.433
SRR3591711White flower10.361
SRR3591712Green floral bud12.771
SRR3591713Yellow flower7.790
SRP173429 SRR8316895Juvenile bud stage 11.357
SRR8316896Juvenile bud stage 18.324
SRR8316897Juvenile bud stage 6.607
SRR8316894Third green stage 5.921
SRR8316900Third green stage 16.174
SRR8316901Third green stage 14.175
SRR8316898Complete white stage 4.924
SRR8316899Complete white stage 15.336
SRR8316903Complete white stage 7.748
SRR8316902Silver flowering stage3.781
SRR8316904Silver flowering stage4.653
SRR8316905Silver flowering stage3.082
SRR8316906Gold flowering stage 8.541
SRR8316907Gold flowering stage 7.315
SRR8316908Gold flowering stage 10.796
SRP132670SRR6706286Control14.786
SRR6706287Light intensity 50%15.648
SRR6706288Light intensity 20%16.152
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.744
CNS0095593Slightly white alabastrum(diploid) 29.438
CNS0095594Slightly white alabastrum(diploid) 38.852
CNS0095595Whole white alabastrum(diploid) 27.657
CNS0095596Whole white alabastrum(diploid) 37.579
CNS0095597Whole white alabastrum(diploid) 46.059
CNS0095598Silvery flower (diploied) 16.279
CNS0095599Silvery flower (diploied) 26.091
CNS0095600Silvery flower (diploied) 38.896
CNS0095601Golden flower (diploid) 13.703
CNS0095602Golden flower (diploid) 29.432
CNS0095603Golden flower (diploid) 38.487
CNS0095604Slightly white alabastrum(tetraploid) 18.243
CNS0095605Slightly white alabastrum(tetraploid) 28.256
CNS0095606Slightly white alabastrum(tetraploid) 312.806
CNS0095607Whole white alabastrum(tetraploid) 15.537
CNS0095608Whole white alabastrum(tetraploid) 23.941
CNS0095609Whole white alabastrum(tetraploid) 310.316
CNS0095610Silvery flower (tetraploid) 16.471
CNS0095611Silvery flower (tetraploid) 27.132
CNS0095612Silvery flower (tetraploid) 39.198
CNS0095613Golden flower (tetraploid) 14.481
CNS0095614Golden flower (tetraploid) 27.366
CNS0095615Golden flower (tetraploid) 34.388
CRA001975CRR073297Stem 119.591
CRR073298Stem 215.579
CRR073299Stem 318.405
CRR073300Leaf 115.582
CRR073301Leaf 212.958
CRR073302Leaf 312.384
CRR073303Juvenile bud 115.117
CRR073304Juvenile bud 211.582
CRR073305Juvenile bud 325.601
CRR073306Third green 16.194
CRR073307Third green 26.154
CRR073308Third green 36.630
CRR073309Second white 18.694
CRR073310Second white 26.284
CRR073311Second white 37.460
CRR073312Silver flowering 17.428
CRR073313Silver flowering 27.701
CRR073314Silver flowering 36.312
CRR073315Gold flowering 16.309
CRR073316Gold flowering 29.935
CRR073317Gold flowering 312.314
CRR073318Tawny withering 112.427
CRR073319Tawny withering 210.017
CRR073320Tawny withering 315.488