Detail information of GWHGAAZE018468


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDO97074.10unnamed protein product [Coffea canephora]
Swissprottr|Q9SXA1|P4KA1_ARATH0Phosphatidylinositol 4-kinase alpha 1
trEMBLtr|A0A068TMA6|A0A068TMA6_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_1 {ECO:0000313|EMBL:CDO97074.1}
TAIR10AT1G49340.20Phosphatidylinositol 3- and 4-kinase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1993004119955113+
GWHAAZE00000005mRNA1993004119955113+
GWHAAZE00000005exon1993004119930982+
GWHAAZE00000005exon1993114419931485+
GWHAAZE00000005exon1993158119931742+
GWHAAZE00000005exon1993273519932902+
GWHAAZE00000005exon1993315619933314+
GWHAAZE00000005exon1993368119933808+
GWHAAZE00000005exon1993394719934253+
GWHAAZE00000005exon1993507819935246+
GWHAAZE00000005exon1993547319935690+
GWHAAZE00000005exon1993621619936297+
GWHAAZE00000005exon1993653019936669+
GWHAAZE00000005exon1993726019937575+
GWHAAZE00000005exon1993809219938519+
GWHAAZE00000005exon1993942019939634+
GWHAAZE00000005exon1994056319940746+
GWHAAZE00000005exon1994083919940975+
GWHAAZE00000005exon1994109119941241+
GWHAAZE00000005exon1994244119942707+
GWHAAZE00000005exon1994484919945021+
GWHAAZE00000005exon1994516319945358+
GWHAAZE00000005exon1995210919952288+
GWHAAZE00000005exon1995288019953088+
GWHAAZE00000005exon1995440119954562+
GWHAAZE00000005exon1995464719955113+
GWHAAZE00000005CDS1993004119930982+
GWHAAZE00000005CDS1993114419931485+
GWHAAZE00000005CDS1993158119931742+
GWHAAZE00000005CDS1993273519932902+
GWHAAZE00000005CDS1993315619933314+
GWHAAZE00000005CDS1993368119933808+
GWHAAZE00000005CDS1993394719934253+
GWHAAZE00000005CDS1993507819935246+
GWHAAZE00000005CDS1993547319935690+
GWHAAZE00000005CDS1993621619936297+
GWHAAZE00000005CDS1993653019936669+
GWHAAZE00000005CDS1993726019937575+
GWHAAZE00000005CDS1993809219938519+
GWHAAZE00000005CDS1993942019939634+
GWHAAZE00000005CDS1994056319940746+
GWHAAZE00000005CDS1994083919940975+
GWHAAZE00000005CDS1994109119941241+
GWHAAZE00000005CDS1994244119942707+
GWHAAZE00000005CDS1994484919945021+
GWHAAZE00000005CDS1994516319945358+
GWHAAZE00000005CDS1995210919952288+
GWHAAZE00000005CDS1995288019953088+
GWHAAZE00000005CDS1995440119954562+
GWHAAZE00000005CDS1995464719954905+
GWHAAZE00000005three_prime_UTR1995490619955113+
Transcript Sequence

Network for GWHGAAZE018468

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00613.21PI3Ka142315088.60E-15
PF00454.28PI3_PI4_kinase162418441.10E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00888PI4KA Metabolic pathways map01100
Inositol phosphate metabolismmap00562
MAPK signaling pathway - yeastmap04011
Phosphatidylinositol signaling systemmap04070

Gene Ontology

GO term OntologyName
GO:0016301molecular_functionkinase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf23.296
SRR3591706second leaf6.773
SRR3591707mature leaf7.303
SRR3591708Shoot apex18.297
SRR3591709Stem18.445
SRR3591710White floral bud8.743
SRR3591711White flower10.138
SRR3591712Green floral bud12.466
SRR3591713Yellow flower3.716
SRP173429 SRR8316895Juvenile bud stage 10.681
SRR8316896Juvenile bud stage 13.551
SRR8316897Juvenile bud stage 6.225
SRR8316894Third green stage 7.201
SRR8316900Third green stage 12.183
SRR8316901Third green stage 11.469
SRR8316898Complete white stage 1.723
SRR8316899Complete white stage 12.267
SRR8316903Complete white stage 4.195
SRR8316902Silver flowering stage1.318
SRR8316904Silver flowering stage2.195
SRR8316905Silver flowering stage0.952
SRR8316906Gold flowering stage 2.529
SRR8316907Gold flowering stage 2.432
SRR8316908Gold flowering stage 2.416
SRP132670SRR6706286Control11.936
SRR6706287Light intensity 50%12.995
SRR6706288Light intensity 20%16.511
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.808
CNS0095593Slightly white alabastrum(diploid) 28.277
CNS0095594Slightly white alabastrum(diploid) 36.807
CNS0095595Whole white alabastrum(diploid) 26.883
CNS0095596Whole white alabastrum(diploid) 34.713
CNS0095597Whole white alabastrum(diploid) 45.806
CNS0095598Silvery flower (diploied) 110.317
CNS0095599Silvery flower (diploied) 210.425
CNS0095600Silvery flower (diploied) 36.258
CNS0095601Golden flower (diploid) 19.039
CNS0095602Golden flower (diploid) 28.756
CNS0095603Golden flower (diploid) 38.068
CNS0095604Slightly white alabastrum(tetraploid) 17.276
CNS0095605Slightly white alabastrum(tetraploid) 25.509
CNS0095606Slightly white alabastrum(tetraploid) 318.610
CNS0095607Whole white alabastrum(tetraploid) 14.728
CNS0095608Whole white alabastrum(tetraploid) 23.105
CNS0095609Whole white alabastrum(tetraploid) 37.323
CNS0095610Silvery flower (tetraploid) 12.007
CNS0095611Silvery flower (tetraploid) 24.107
CNS0095612Silvery flower (tetraploid) 35.232
CNS0095613Golden flower (tetraploid) 11.376
CNS0095614Golden flower (tetraploid) 21.303
CNS0095615Golden flower (tetraploid) 31.240
CRA001975CRR073297Stem 118.483
CRR073298Stem 217.437
CRR073299Stem 312.865
CRR073300Leaf 118.290
CRR073301Leaf 214.160
CRR073302Leaf 311.368
CRR073303Juvenile bud 111.899
CRR073304Juvenile bud 26.213
CRR073305Juvenile bud 318.424
CRR073306Third green 11.896
CRR073307Third green 21.326
CRR073308Third green 31.725
CRR073309Second white 11.051
CRR073310Second white 21.144
CRR073311Second white 31.130
CRR073312Silver flowering 10.891
CRR073313Silver flowering 21.462
CRR073314Silver flowering 31.050
CRR073315Gold flowering 12.889
CRR073316Gold flowering 24.178
CRR073317Gold flowering 32.583
CRR073318Tawny withering 114.685
CRR073319Tawny withering 212.101
CRR073320Tawny withering 315.731