Gene detail

Detail information of GWHGAAZE018503

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_006423130.1	0	hypothetical protein CICLE_v10030016mg [Citrus clementina]
Swissprot	tr\|Q9SZ46\|C82C4_ARATH	0	Cytochrome P450 82C4
trEMBL	tr\|V4SC16\|V4SC16_9ROSI	0	Uncharacterized protein {ECO:0000313\|EMBL:ESR36370.1}
TAIR10	AT4G31940.1	6E-161	cytochrome P450, family 82, subfamily C, polypeptide 4

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	20436610	20438836	-
GWHAAZE00000005	mRNA	20436610	20438836	-
GWHAAZE00000005	exon	20436610	20437236	-
GWHAAZE00000005	exon	20437886	20438836	-
GWHAAZE00000005	CDS	20437886	20438836	-
GWHAAZE00000005	CDS	20436610	20437236	-

Transcript Sequence
>GWHTAAZE018525 ATGGAATTTTACTTTCATCTGCAAGAGATTGCACTATATGGATTTATTTTCGCCATTACATGTTTATGGATCTTCATCATCAACGCAAGAAGCAACAAGAACAAGCCCAAGACACCGCCAGAGCCAGCTGGGGCTTGGCCTTTCATCGGTCACCTTCTTCTTTTAAAGCCCAATGATCTATTACACCGTACGCTTGGAGCTATTGCCGATAAGTATGGACCCGTCTTCTCTATGCAACTTGGCGCTCACCGGACTCTAGTGATTAGTAGCTGGCAAGTGGCAAAAGAGTGCTTTACTATCCACGATCGAGTCTTCTCCACGCGCCCTAAGTCTCTAGCTGTAAAGCTAATGGGCTATGACCATGCCATGTTCGGCTTTGCCCCATATGGTTCATATTGGCGCGATGTGCGTAAGCTAGCCGTGGTTGAGCTATTGTCAGGTCCCCGGCTTGATATGCGTAAACGCGTTTGGGATACGGAGGTGGATTTTTTAATGAAAATGTTGTATGAGCAATGGGTCGGGGACGGGGCTACGGGCCCCATAATGGTGGAGATGAAGGAAAAGCTTGGTGATATGGCGATGAATGTAGTGGTGAGAATGGTGGCAGGGAAACGGTATTTTGGGAACTGGGCGTGTGATGAGGAATCCAAGCGTTGTCAAAAGGCCATGGGAGATTTTATGTTTTTGGTGGGGACGGCAATGGTTTCGGATGCAATGCCGACTTTTGGTTGGTTGGATTCATTGAAGGGATATAAGAGAGAGATGATACGAACGGCTAAGGAGATTGATTGCGTGCTAGGTGGTTGGGTGGAGGAGCATCGACTGAAGAAGAGGCTAGGTGGAGTCGTCAATGAATCCGAGCATGACTTCATTGATGTAATGTTGTCTGTCATCGATAGTGGCTCTTTCTCCGGTCTTGATGGCGATCTTGTCATTAAATCTACTTGCTTGAGTCTTATCTTAGGTGGCAATGACACGACTGTGGTCACACTTACGTGGGCACTCTCTTTGCTACTGAACAACCGCCAAGTATTGAAGAAAGCCCAAGATGAGTTGGACGTCCACGTAGGAAGGCAGCGCAAAGTAGACGAGTCGGATGTAAAGAATCTAATATACTTGCAAGCTATAGTTAAGGAAACATTACGACTATACCCAGCCTTGCCAGTGTCAGCACCACGTGAAGCTATGGAGGACTGCACTGTGGCAGGCTTCTATGTCCCTGCTGGCACGCGCCTATTTATTAACCTCTGGAAGTTGCACCGGGACCCATGCATTTGGTCCGACCCTTTGGCTTTCCAACCTGAGAGGTTCCTCGGGAAGCACGCTGAGTTGAATATTAAGGGTCAGGATTTTGAACTTATACCGTTTGGGTCAGGAAGAAGGTCGTGCCCGGGGATCCAATTTGCAATGCGGGTCTTGCATTTGACATTGGCCCGACTTCTTCATGGGTTTTCACTTGGAACCGTGTCTGACTCAGCTGTCGATATGGCTGAAAGTCCGGGGCTGACTGTACCCAAAGCAACTCCATTGCAGGTTACACTCATTCCGCGCCTATATTCTAGTCTCTACAATTGTTAA

Network for GWHGAAZE018503

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	40	505	5.20E-86

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	12.410
	SRR3591706	second leaf	24.723
	SRR3591707	mature leaf	25.598
	SRR3591708	Shoot apex	15.429
	SRR3591709	Stem	10.819
	SRR3591710	White floral bud	11.750
	SRR3591711	White flower	19.708
	SRR3591712	Green floral bud	14.404
	SRR3591713	Yellow flower	17.725
SRP173429	SRR8316895	Juvenile bud stage	28.047
	SRR8316896	Juvenile bud stage	30.498
	SRR8316897	Juvenile bud stage	12.166
	SRR8316894	Third green stage	10.305
	SRR8316900	Third green stage	30.891
	SRR8316901	Third green stage	44.141
	SRR8316898	Complete white stage	18.508
	SRR8316899	Complete white stage	40.730
	SRR8316903	Complete white stage	27.942
	SRR8316902	Silver flowering stage	18.008
	SRR8316904	Silver flowering stage	26.353
	SRR8316905	Silver flowering stage	13.897
	SRR8316906	Gold flowering stage	31.043
	SRR8316907	Gold flowering stage	21.886
	SRR8316908	Gold flowering stage	40.214
SRP132670	SRR6706286	Control	55.425
	SRR6706287	Light intensity 50%	37.531
	SRR6706288	Light intensity 20%	31.601
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	28.358
	CNS0095593	Slightly white alabastrum(diploid) 2	29.458
	CNS0095594	Slightly white alabastrum(diploid) 3	29.604
	CNS0095595	Whole white alabastrum(diploid) 2	32.383
	CNS0095596	Whole white alabastrum(diploid) 3	12.844
	CNS0095597	Whole white alabastrum(diploid) 4	25.283
	CNS0095598	Silvery flower (diploied) 1	54.465
	CNS0095599	Silvery flower (diploied) 2	49.367
	CNS0095600	Silvery flower (diploied) 3	53.804
	CNS0095601	Golden flower (diploid) 1	48.695
	CNS0095602	Golden flower (diploid) 2	99.007
	CNS0095603	Golden flower (diploid) 3	94.121
	CNS0095604	Slightly white alabastrum(tetraploid) 1	24.784
	CNS0095605	Slightly white alabastrum(tetraploid) 2	26.714
	CNS0095606	Slightly white alabastrum(tetraploid) 3	79.879
	CNS0095607	Whole white alabastrum(tetraploid) 1	17.102
	CNS0095608	Whole white alabastrum(tetraploid) 2	10.555
	CNS0095609	Whole white alabastrum(tetraploid) 3	31.589
	CNS0095610	Silvery flower (tetraploid) 1	101.407
	CNS0095611	Silvery flower (tetraploid) 2	78.246
	CNS0095612	Silvery flower (tetraploid) 3	13.175
	CNS0095613	Golden flower (tetraploid) 1	69.850
	CNS0095614	Golden flower (tetraploid) 2	137.281
	CNS0095615	Golden flower (tetraploid) 3	26.848
CRA001975	CRR073297	Stem 1	11.368
	CRR073298	Stem 2	12.115
	CRR073299	Stem 3	17.962
	CRR073300	Leaf 1	9.240
	CRR073301	Leaf 2	13.261
	CRR073302	Leaf 3	8.181
	CRR073303	Juvenile bud 1	19.054
	CRR073304	Juvenile bud 2	19.085
	CRR073305	Juvenile bud 3	24.754
	CRR073306	Third green 1	8.478
	CRR073307	Third green 2	8.040
	CRR073308	Third green 3	8.959
	CRR073309	Second white 1	13.439
	CRR073310	Second white 2	9.770
	CRR073311	Second white 3	8.521
	CRR073312	Silver flowering 1	12.341
	CRR073313	Silver flowering 2	18.270
	CRR073314	Silver flowering 3	17.965
	CRR073315	Gold flowering 1	26.047
	CRR073316	Gold flowering 2	20.443
	CRR073317	Gold flowering 3	29.648
	CRR073318	Tawny withering 1	24.760
	CRR073319	Tawny withering 2	16.985
	CRR073320	Tawny withering 3	30.264