Detail information of GWHGAAZE018541


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010263552.11.893E-111PREDICTED: LAG1 longevity assurance homolog 2-like [Nelumbo nucifera]
Swissprottr|Q9LJK3|LAG12_ARATH2E-93LAG1 longevity assurance homolog 2
trEMBLtr|A0A061E0W3|A0A061E0W3_THECC5E-110Longevity assurance factor, putative {ECO:0000313|EMBL:EOX98257.1}
TAIR10AT3G19260.11E-70LAG1 homologue 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene2093326820939209-
GWHAAZE00000005mRNA2093326820939209-
GWHAAZE00000005exon2093909020939209-
GWHAAZE00000005exon2093723820937539-
GWHAAZE00000005exon2093601720936172-
GWHAAZE00000005exon2093326820933514-
GWHAAZE00000005CDS2093909020939209-
GWHAAZE00000005CDS2093723820937539-
GWHAAZE00000005CDS2093601720936172-
GWHAAZE00000005CDS2093326820933514-
Transcript Sequence

Network for GWHGAAZE018541

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03798.17TRAM_LAG1_CLN8972597.70E-36
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K23727CERS5_6, LASS5_6 Metabolic pathways map01100
Sphingolipid metabolismmap00600
Sphingolipid signaling pathwaymap04071

Gene Ontology

GO term OntologyName
GO:0016021cellular_componentintegral component of membrane

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf20.577
SRR3591706second leaf14.242
SRR3591707mature leaf11.176
SRR3591708Shoot apex18.797
SRR3591709Stem14.667
SRR3591710White floral bud44.576
SRR3591711White flower19.586
SRR3591712Green floral bud21.781
SRR3591713Yellow flower17.535
SRP173429 SRR8316895Juvenile bud stage 7.444
SRR8316896Juvenile bud stage 10.871
SRR8316897Juvenile bud stage 4.262
SRR8316894Third green stage 5.048
SRR8316900Third green stage 16.073
SRR8316901Third green stage 15.609
SRR8316898Complete white stage 7.337
SRR8316899Complete white stage 16.525
SRR8316903Complete white stage 12.913
SRR8316902Silver flowering stage8.002
SRR8316904Silver flowering stage12.374
SRR8316905Silver flowering stage4.555
SRR8316906Gold flowering stage 19.197
SRR8316907Gold flowering stage 17.245
SRR8316908Gold flowering stage 22.888
SRP132670SRR6706286Control8.379
SRR6706287Light intensity 50%7.991
SRR6706288Light intensity 20%7.561
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.223
CNS0095593Slightly white alabastrum(diploid) 27.708
CNS0095594Slightly white alabastrum(diploid) 38.203
CNS0095595Whole white alabastrum(diploid) 211.694
CNS0095596Whole white alabastrum(diploid) 311.236
CNS0095597Whole white alabastrum(diploid) 413.198
CNS0095598Silvery flower (diploied) 111.904
CNS0095599Silvery flower (diploied) 214.040
CNS0095600Silvery flower (diploied) 317.877
CNS0095601Golden flower (diploid) 18.225
CNS0095602Golden flower (diploid) 217.155
CNS0095603Golden flower (diploid) 315.001
CNS0095604Slightly white alabastrum(tetraploid) 111.616
CNS0095605Slightly white alabastrum(tetraploid) 29.334
CNS0095606Slightly white alabastrum(tetraploid) 316.042
CNS0095607Whole white alabastrum(tetraploid) 19.324
CNS0095608Whole white alabastrum(tetraploid) 214.011
CNS0095609Whole white alabastrum(tetraploid) 314.553
CNS0095610Silvery flower (tetraploid) 115.619
CNS0095611Silvery flower (tetraploid) 216.076
CNS0095612Silvery flower (tetraploid) 329.480
CNS0095613Golden flower (tetraploid) 111.334
CNS0095614Golden flower (tetraploid) 213.764
CNS0095615Golden flower (tetraploid) 324.324
CRA001975CRR073297Stem 116.082
CRR073298Stem 216.308
CRR073299Stem 317.187
CRR073300Leaf 118.863
CRR073301Leaf 216.277
CRR073302Leaf 316.846
CRR073303Juvenile bud 126.311
CRR073304Juvenile bud 229.278
CRR073305Juvenile bud 315.484
CRR073306Third green 128.725
CRR073307Third green 226.039
CRR073308Third green 322.304
CRR073309Second white 122.251
CRR073310Second white 217.896
CRR073311Second white 320.104
CRR073312Silver flowering 128.873
CRR073313Silver flowering 239.163
CRR073314Silver flowering 320.582
CRR073315Gold flowering 131.363
CRR073316Gold flowering 230.355
CRR073317Gold flowering 331.878
CRR073318Tawny withering 137.827
CRR073319Tawny withering 225.446
CRR073320Tawny withering 331.287