Detail information of GWHGAAZE018579


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010556427.11.25115E-81PREDICTED: transcription factor MYB44-like [Tarenaya hassleriana]
Swissprottr|Q9FDW1|MYB44_ARATH3E-68Transcription factor MYB44
trEMBLtr|F6HSY7|F6HSY7_VITVI7E-83Putative uncharacterized protein {ECO:0000313|EMBL:CCB57797.1}
TAIR10AT4G37260.15E-58myb domain protein 73

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene2141195921412741+
GWHAAZE00000005mRNA2141195921412741+
GWHAAZE00000005exon2141195921412741+
GWHAAZE00000005CDS2141195921412741+
Transcript Sequence

Network for GWHGAAZE018579

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.32Myb_DNA-binding12571.00E-17
PF00249.32Myb_DNA-binding651073.80E-15
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.323
SRR3591706second leaf0.150
SRR3591707mature leaf0.345
SRR3591708Shoot apex14.064
SRR3591709Stem2.542
SRR3591710White floral bud49.849
SRR3591711White flower110.531
SRR3591712Green floral bud4.991
SRR3591713Yellow flower125.738
SRP173429 SRR8316895Juvenile bud stage 9.096
SRR8316896Juvenile bud stage 11.786
SRR8316897Juvenile bud stage 11.666
SRR8316894Third green stage 2.775
SRR8316900Third green stage 3.677
SRR8316901Third green stage 13.627
SRR8316898Complete white stage 18.244
SRR8316899Complete white stage 4.730
SRR8316903Complete white stage 36.658
SRR8316902Silver flowering stage58.966
SRR8316904Silver flowering stage74.836
SRR8316905Silver flowering stage48.167
SRR8316906Gold flowering stage 193.713
SRR8316907Gold flowering stage 234.936
SRR8316908Gold flowering stage 211.442
SRP132670SRR6706286Control9.820
SRR6706287Light intensity 50%11.250
SRR6706288Light intensity 20%3.985
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.687
CNS0095593Slightly white alabastrum(diploid) 25.704
CNS0095594Slightly white alabastrum(diploid) 38.731
CNS0095595Whole white alabastrum(diploid) 24.783
CNS0095596Whole white alabastrum(diploid) 31.560
CNS0095597Whole white alabastrum(diploid) 43.924
CNS0095598Silvery flower (diploied) 154.076
CNS0095599Silvery flower (diploied) 266.164
CNS0095600Silvery flower (diploied) 3191.324
CNS0095601Golden flower (diploid) 196.389
CNS0095602Golden flower (diploid) 2173.936
CNS0095603Golden flower (diploid) 3167.985
CNS0095604Slightly white alabastrum(tetraploid) 14.058
CNS0095605Slightly white alabastrum(tetraploid) 24.603
CNS0095606Slightly white alabastrum(tetraploid) 32.910
CNS0095607Whole white alabastrum(tetraploid) 14.927
CNS0095608Whole white alabastrum(tetraploid) 22.725
CNS0095609Whole white alabastrum(tetraploid) 35.105
CNS0095610Silvery flower (tetraploid) 1120.724
CNS0095611Silvery flower (tetraploid) 2123.446
CNS0095612Silvery flower (tetraploid) 3250.864
CNS0095613Golden flower (tetraploid) 1278.637
CNS0095614Golden flower (tetraploid) 2177.835
CNS0095615Golden flower (tetraploid) 3288.095
CRA001975CRR073297Stem 15.240
CRR073298Stem 23.909
CRR073299Stem 33.506
CRR073300Leaf 12.290
CRR073301Leaf 22.782
CRR073302Leaf 32.211
CRR073303Juvenile bud 10.642
CRR073304Juvenile bud 21.879
CRR073305Juvenile bud 30.800
CRR073306Third green 157.484
CRR073307Third green 255.644
CRR073308Third green 355.822
CRR073309Second white 138.216
CRR073310Second white 265.527
CRR073311Second white 361.243
CRR073312Silver flowering 192.359
CRR073313Silver flowering 265.391
CRR073314Silver flowering 364.354
CRR073315Gold flowering 14.646
CRR073316Gold flowering 22.346
CRR073317Gold flowering 32.089
CRR073318Tawny withering 18.764
CRR073319Tawny withering 25.582
CRR073320Tawny withering 38.434