Detail information of GWHGAAZE018581


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDO97223.10unnamed protein product [Coffea canephora]
Swissprottr|P42495|CADH1_ARACO0Probable cinnamyl alcohol dehydrogenase 1
trEMBLtr|A0A068TPF4|A0A068TPF4_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_1 {ECO:0000313|EMBL:CDO97223.1}
TAIR10AT4G34230.12E-139cinnamyl alcohol dehydrogenase 5

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene2142865221430943-
GWHAAZE00000005mRNA2142865221430943-
GWHAAZE00000005exon2143079521430943-
GWHAAZE00000005exon2143053821430651-
GWHAAZE00000005exon2142989921430126-
GWHAAZE00000005exon2142928221429721-
GWHAAZE00000005exon2142865221429058-
GWHAAZE00000005five_prime_UTR2143088421430943-
GWHAAZE00000005CDS2143079521430883-
GWHAAZE00000005CDS2143053821430651-
GWHAAZE00000005CDS2142989921430126-
GWHAAZE00000005CDS2142928221429721-
GWHAAZE00000005CDS2142885621429058-
GWHAAZE00000005three_prime_UTR2142865221428855-
Transcript Sequence

Network for GWHGAAZE018581

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08240.13ADH_N351491.00E-26
PF00107.27ADH_zinc_N1913131.50E-18
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00083CAD Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Phenylpropanoid biosynthesismap00940

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0008270molecular_functionzinc ion binding
GO:0016491molecular_functionoxidoreductase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf25.106
SRR3591706second leaf1.447
SRR3591707mature leaf2.881
SRR3591708Shoot apex1.382
SRR3591709Stem370.043
SRR3591710White floral bud48.863
SRR3591711White flower52.672
SRR3591712Green floral bud13.157
SRR3591713Yellow flower33.943
SRP173429 SRR8316895Juvenile bud stage 9.901
SRR8316896Juvenile bud stage 16.776
SRR8316897Juvenile bud stage 7.295
SRR8316894Third green stage 3.464
SRR8316900Third green stage 10.770
SRR8316901Third green stage 10.383
SRR8316898Complete white stage 12.104
SRR8316899Complete white stage 20.568
SRR8316903Complete white stage 14.260
SRR8316902Silver flowering stage4.592
SRR8316904Silver flowering stage6.248
SRR8316905Silver flowering stage1.338
SRR8316906Gold flowering stage 5.644
SRR8316907Gold flowering stage 6.693
SRR8316908Gold flowering stage 26.174
SRP132670SRR6706286Control12.829
SRR6706287Light intensity 50%12.210
SRR6706288Light intensity 20%10.773
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.971
CNS0095593Slightly white alabastrum(diploid) 28.922
CNS0095594Slightly white alabastrum(diploid) 320.967
CNS0095595Whole white alabastrum(diploid) 27.097
CNS0095596Whole white alabastrum(diploid) 32.534
CNS0095597Whole white alabastrum(diploid) 49.178
CNS0095598Silvery flower (diploied) 156.580
CNS0095599Silvery flower (diploied) 244.306
CNS0095600Silvery flower (diploied) 318.381
CNS0095601Golden flower (diploid) 130.401
CNS0095602Golden flower (diploid) 226.964
CNS0095603Golden flower (diploid) 329.663
CNS0095604Slightly white alabastrum(tetraploid) 14.514
CNS0095605Slightly white alabastrum(tetraploid) 25.862
CNS0095606Slightly white alabastrum(tetraploid) 32.820
CNS0095607Whole white alabastrum(tetraploid) 15.863
CNS0095608Whole white alabastrum(tetraploid) 23.376
CNS0095609Whole white alabastrum(tetraploid) 313.600
CNS0095610Silvery flower (tetraploid) 113.842
CNS0095611Silvery flower (tetraploid) 211.411
CNS0095612Silvery flower (tetraploid) 34.851
CNS0095613Golden flower (tetraploid) 15.633
CNS0095614Golden flower (tetraploid) 220.406
CNS0095615Golden flower (tetraploid) 32.455
CRA001975CRR073297Stem 16.654
CRR073298Stem 210.112
CRR073299Stem 36.860
CRR073300Leaf 16.765
CRR073301Leaf 28.539
CRR073302Leaf 36.515
CRR073303Juvenile bud 18.112
CRR073304Juvenile bud 215.298
CRR073305Juvenile bud 314.565
CRR073306Third green 19.094
CRR073307Third green 25.179
CRR073308Third green 39.504
CRR073309Second white 10.858
CRR073310Second white 21.533
CRR073311Second white 30.658
CRR073312Silver flowering 13.240
CRR073313Silver flowering 22.903
CRR073314Silver flowering 34.904
CRR073315Gold flowering 10.262
CRR073316Gold flowering 20.744
CRR073317Gold flowering 30.970
CRR073318Tawny withering 1142.453
CRR073319Tawny withering 2132.175
CRR073320Tawny withering 3141.834