Detail information of GWHGAAZE018593


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004490325.10PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.1-like [Cicer arietinum]
Swissprottr|O82333|GH31_ARATH0Probable indole-3-acetic acid-amido synthetase GH3.1
trEMBLtr|A0A061E230|A0A061E230_THECC0Auxin-responsive GH3 family protein {ECO:0000313|EMBL:EOX98401.1}
TAIR10AT2G14960.10Auxin-responsive GH3 family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene2160130021603629+
GWHAAZE00000005mRNA2160130021603629+
GWHAAZE00000005exon2160130021601619+
GWHAAZE00000005exon2160174721601848+
GWHAAZE00000005exon2160226121603629+
GWHAAZE00000005CDS2160130021601619+
GWHAAZE00000005CDS2160174721601848+
GWHAAZE00000005CDS2160226121603629+
Transcript Sequence

Network for GWHGAAZE018593

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03321.14GH3265662.50E-204
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14487GH3 Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf71.077
SRR3591706second leaf1.095
SRR3591707mature leaf0.401
SRR3591708Shoot apex13.789
SRR3591709Stem57.041
SRR3591710White floral bud13.641
SRR3591711White flower137.030
SRR3591712Green floral bud40.200
SRR3591713Yellow flower516.294
SRP173429 SRR8316895Juvenile bud stage 6.774
SRR8316896Juvenile bud stage 33.903
SRR8316897Juvenile bud stage 21.285
SRR8316894Third green stage 14.687
SRR8316900Third green stage 29.270
SRR8316901Third green stage 46.023
SRR8316898Complete white stage 7.078
SRR8316899Complete white stage 8.363
SRR8316903Complete white stage 12.680
SRR8316902Silver flowering stage36.555
SRR8316904Silver flowering stage42.618
SRR8316905Silver flowering stage30.544
SRR8316906Gold flowering stage 210.894
SRR8316907Gold flowering stage 89.686
SRR8316908Gold flowering stage 187.532
SRP132670SRR6706286Control100.566
SRR6706287Light intensity 50%50.402
SRR6706288Light intensity 20%48.860
CNP0000432CNS0095592Slightly white alabastrum(diploid) 117.778
CNS0095593Slightly white alabastrum(diploid) 216.399
CNS0095594Slightly white alabastrum(diploid) 329.832
CNS0095595Whole white alabastrum(diploid) 233.070
CNS0095596Whole white alabastrum(diploid) 348.459
CNS0095597Whole white alabastrum(diploid) 453.387
CNS0095598Silvery flower (diploied) 122.715
CNS0095599Silvery flower (diploied) 236.044
CNS0095600Silvery flower (diploied) 361.872
CNS0095601Golden flower (diploid) 132.942
CNS0095602Golden flower (diploid) 2130.770
CNS0095603Golden flower (diploid) 3124.477
CNS0095604Slightly white alabastrum(tetraploid) 112.018
CNS0095605Slightly white alabastrum(tetraploid) 215.908
CNS0095606Slightly white alabastrum(tetraploid) 31.803
CNS0095607Whole white alabastrum(tetraploid) 136.093
CNS0095608Whole white alabastrum(tetraploid) 229.596
CNS0095609Whole white alabastrum(tetraploid) 356.244
CNS0095610Silvery flower (tetraploid) 118.340
CNS0095611Silvery flower (tetraploid) 230.334
CNS0095612Silvery flower (tetraploid) 337.408
CNS0095613Golden flower (tetraploid) 1204.725
CNS0095614Golden flower (tetraploid) 265.848
CNS0095615Golden flower (tetraploid) 3352.192
CRA001975CRR073297Stem 124.272
CRR073298Stem 247.187
CRR073299Stem 373.322
CRR073300Leaf 117.760
CRR073301Leaf 220.731
CRR073302Leaf 320.655
CRR073303Juvenile bud 118.361
CRR073304Juvenile bud 228.371
CRR073305Juvenile bud 328.634
CRR073306Third green 1195.256
CRR073307Third green 2150.065
CRR073308Third green 3132.122
CRR073309Second white 176.996
CRR073310Second white 273.105
CRR073311Second white 363.352
CRR073312Silver flowering 1322.419
CRR073313Silver flowering 2407.915
CRR073314Silver flowering 3442.035
CRR073315Gold flowering 11.860
CRR073316Gold flowering 26.629
CRR073317Gold flowering 318.924
CRR073318Tawny withering 128.187
CRR073319Tawny withering 2134.066
CRR073320Tawny withering 333.032