Detail information of GWHGAAZE018616


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002264302.16.16088E-77PREDICTED: zinc finger protein ZAT10 [Vitis vinifera]
Swissprottr|Q96289|ZAT10_ARATH4E-62Zinc finger protein ZAT10
trEMBLtr|F6H663|F6H663_VITVI2E-77Putative uncharacterized protein {ECO:0000313|EMBL:CCB47705.1}
TAIR10AT1G27730.11E-38salt tolerance zinc finger

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene2181022521810947-
GWHAAZE00000005mRNA2181022521810947-
GWHAAZE00000005exon2181079421810947-
GWHAAZE00000005exon2181034721810763-
GWHAAZE00000005exon2181022521810313-
GWHAAZE00000005CDS2181079421810947-
GWHAAZE00000005CDS2181034721810763-
GWHAAZE00000005CDS2181022521810313-
Transcript Sequence

Network for GWHGAAZE018616

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13912.7zf-C2H2_666902.70E-14
PF13912.7zf-C2H2_61251494.70E-12
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676molecular_functionnucleic acid binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf67.203
SRR3591706second leaf15.524
SRR3591707mature leaf19.259
SRR3591708Shoot apex20.858
SRR3591709Stem98.080
SRR3591710White floral bud154.475
SRR3591711White flower219.850
SRR3591712Green floral bud32.990
SRR3591713Yellow flower339.641
SRP173429 SRR8316895Juvenile bud stage 85.783
SRR8316896Juvenile bud stage 76.091
SRR8316897Juvenile bud stage 62.137
SRR8316894Third green stage 24.149
SRR8316900Third green stage 45.992
SRR8316901Third green stage 93.585
SRR8316898Complete white stage 46.812
SRR8316899Complete white stage 147.946
SRR8316903Complete white stage 79.629
SRR8316902Silver flowering stage83.947
SRR8316904Silver flowering stage80.056
SRR8316905Silver flowering stage76.333
SRR8316906Gold flowering stage 237.749
SRR8316907Gold flowering stage 272.455
SRR8316908Gold flowering stage 184.013
SRP132670SRR6706286Control58.504
SRR6706287Light intensity 50%48.642
SRR6706288Light intensity 20%29.378
CNP0000432CNS0095592Slightly white alabastrum(diploid) 142.641
CNS0095593Slightly white alabastrum(diploid) 258.814
CNS0095594Slightly white alabastrum(diploid) 359.138
CNS0095595Whole white alabastrum(diploid) 232.863
CNS0095596Whole white alabastrum(diploid) 38.464
CNS0095597Whole white alabastrum(diploid) 434.161
CNS0095598Silvery flower (diploied) 1177.603
CNS0095599Silvery flower (diploied) 2234.073
CNS0095600Silvery flower (diploied) 3326.410
CNS0095601Golden flower (diploid) 1231.077
CNS0095602Golden flower (diploid) 2309.759
CNS0095603Golden flower (diploid) 3294.104
CNS0095604Slightly white alabastrum(tetraploid) 17.932
CNS0095605Slightly white alabastrum(tetraploid) 28.046
CNS0095606Slightly white alabastrum(tetraploid) 36.488
CNS0095607Whole white alabastrum(tetraploid) 14.670
CNS0095608Whole white alabastrum(tetraploid) 23.618
CNS0095609Whole white alabastrum(tetraploid) 39.973
CNS0095610Silvery flower (tetraploid) 1112.867
CNS0095611Silvery flower (tetraploid) 2126.510
CNS0095612Silvery flower (tetraploid) 3169.816
CNS0095613Golden flower (tetraploid) 1229.941
CNS0095614Golden flower (tetraploid) 2153.147
CNS0095615Golden flower (tetraploid) 3425.926
CRA001975CRR073297Stem 154.250
CRR073298Stem 266.510
CRR073299Stem 363.618
CRR073300Leaf 1110.944
CRR073301Leaf 2141.364
CRR073302Leaf 397.971
CRR073303Juvenile bud 1110.659
CRR073304Juvenile bud 2191.637
CRR073305Juvenile bud 3254.140
CRR073306Third green 1495.310
CRR073307Third green 2422.863
CRR073308Third green 3392.519
CRR073309Second white 1623.284
CRR073310Second white 2454.512
CRR073311Second white 3325.996
CRR073312Silver flowering 1657.433
CRR073313Silver flowering 2853.597
CRR073314Silver flowering 3599.549
CRR073315Gold flowering 141.535
CRR073316Gold flowering 281.266
CRR073317Gold flowering 388.262
CRR073318Tawny withering 163.489
CRR073319Tawny withering 2214.198
CRR073320Tawny withering 397.055