Detail information of GWHGAAZE018618


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009777463.10PREDICTED: mitotic checkpoint protein BUB3.1 [Nicotiana sylvestris]
Swissprottr|Q9C701|BUB32_ARATH0Mitotic checkpoint protein BUB3.2
trEMBLtr|A0A061E084|A0A061E084_THECC0Transducin/WD40 repeat-like superfamily protein {ECO:0000313|EMBL:EOX98459.1}
TAIR10AT1G49910.14E-163Transducin/WD40 repeat-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene2182393921829090-
GWHAAZE00000005mRNA2182393921829090-
GWHAAZE00000005exon2182887021829090-
GWHAAZE00000005exon2182860321828733-
GWHAAZE00000005exon2182718321827277-
GWHAAZE00000005exon2182666321826770-
GWHAAZE00000005exon2182578621826052-
GWHAAZE00000005exon2182525121825326-
GWHAAZE00000005exon2182474821824828-
GWHAAZE00000005exon2182430121824379-
GWHAAZE00000005exon2182411221824212-
GWHAAZE00000005exon2182393921824026-
GWHAAZE00000005five_prime_UTR2182898721829090-
GWHAAZE00000005CDS2182887021828986-
GWHAAZE00000005CDS2182860321828733-
GWHAAZE00000005CDS2182718321827277-
GWHAAZE00000005CDS2182666321826770-
GWHAAZE00000005CDS2182578621826052-
GWHAAZE00000005CDS2182525121825326-
GWHAAZE00000005CDS2182474821824828-
GWHAAZE00000005CDS2182430121824379-
GWHAAZE00000005CDS2182411221824212-
GWHAAZE00000005CDS2182393921824026-
Transcript Sequence

Network for GWHGAAZE018618

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00400.33WD4019450.032
PF00400.33WD401361660.0056
PF00400.33WD402683090.0066
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyDWD

KEGG pathway

KO Enzyme pathway mapID
K02180BUB3 Cell cycle map04110
Cell cycle - yeastmap04111

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf45.956
SRR3591706second leaf12.139
SRR3591707mature leaf9.886
SRR3591708Shoot apex83.174
SRR3591709Stem26.625
SRR3591710White floral bud18.729
SRR3591711White flower31.067
SRR3591712Green floral bud13.986
SRR3591713Yellow flower38.013
SRP173429 SRR8316895Juvenile bud stage 17.879
SRR8316896Juvenile bud stage 23.195
SRR8316897Juvenile bud stage 11.274
SRR8316894Third green stage 9.051
SRR8316900Third green stage 22.640
SRR8316901Third green stage 21.219
SRR8316898Complete white stage 10.646
SRR8316899Complete white stage 27.429
SRR8316903Complete white stage 16.377
SRR8316902Silver flowering stage11.191
SRR8316904Silver flowering stage16.283
SRR8316905Silver flowering stage10.806
SRR8316906Gold flowering stage 38.295
SRR8316907Gold flowering stage 35.740
SRR8316908Gold flowering stage 38.258
SRP132670SRR6706286Control19.090
SRR6706287Light intensity 50%22.739
SRR6706288Light intensity 20%23.976
CNP0000432CNS0095592Slightly white alabastrum(diploid) 125.078
CNS0095593Slightly white alabastrum(diploid) 223.448
CNS0095594Slightly white alabastrum(diploid) 323.388
CNS0095595Whole white alabastrum(diploid) 217.281
CNS0095596Whole white alabastrum(diploid) 316.764
CNS0095597Whole white alabastrum(diploid) 413.682
CNS0095598Silvery flower (diploied) 122.406
CNS0095599Silvery flower (diploied) 220.025
CNS0095600Silvery flower (diploied) 327.661
CNS0095601Golden flower (diploid) 118.923
CNS0095602Golden flower (diploid) 222.293
CNS0095603Golden flower (diploid) 323.136
CNS0095604Slightly white alabastrum(tetraploid) 120.021
CNS0095605Slightly white alabastrum(tetraploid) 217.524
CNS0095606Slightly white alabastrum(tetraploid) 326.569
CNS0095607Whole white alabastrum(tetraploid) 117.532
CNS0095608Whole white alabastrum(tetraploid) 212.874
CNS0095609Whole white alabastrum(tetraploid) 316.949
CNS0095610Silvery flower (tetraploid) 131.892
CNS0095611Silvery flower (tetraploid) 231.275
CNS0095612Silvery flower (tetraploid) 332.330
CNS0095613Golden flower (tetraploid) 132.531
CNS0095614Golden flower (tetraploid) 236.601
CNS0095615Golden flower (tetraploid) 325.482
CRA001975CRR073297Stem 129.062
CRR073298Stem 227.173
CRR073299Stem 340.722
CRR073300Leaf 125.471
CRR073301Leaf 226.489
CRR073302Leaf 325.843
CRR073303Juvenile bud 121.203
CRR073304Juvenile bud 225.624
CRR073305Juvenile bud 322.889
CRR073306Third green 121.066
CRR073307Third green 218.451
CRR073308Third green 318.620
CRR073309Second white 125.936
CRR073310Second white 228.439
CRR073311Second white 328.146
CRR073312Silver flowering 126.040
CRR073313Silver flowering 228.541
CRR073314Silver flowering 330.102
CRR073315Gold flowering 121.053
CRR073316Gold flowering 218.424
CRR073317Gold flowering 316.922
CRR073318Tawny withering 149.256
CRR073319Tawny withering 238.041
CRR073320Tawny withering 349.996