Detail information of GWHGAAZE018850


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009348751.10PREDICTED: serine/threonine-protein kinase SRK2A [Pyrus x bretschneideri]
Swissprottr|Q7XQP4|SAPK7_ORYSJ0Serine/threonine-protein kinase SAPK7
trEMBLtr|M5XWC3|M5XWC3_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ23465.1}
TAIR10AT1G60940.23E-146SNF1-related protein kinase 2.10

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene2547523525480327-
GWHAAZE00000005mRNA2547523525480327-
GWHAAZE00000005exon2547523525475558-
GWHAAZE00000005exon2547651725476615-
GWHAAZE00000005exon2547678225476886-
GWHAAZE00000005exon2547899525479087-
GWHAAZE00000005exon2547916925479261-
GWHAAZE00000005exon2547944225479495-
GWHAAZE00000005exon2547962125479722-
GWHAAZE00000005exon2548020825480327-
GWHAAZE00000005CDS2548020825480327-
GWHAAZE00000005CDS2547962125479722-
GWHAAZE00000005CDS2547944225479495-
GWHAAZE00000005CDS2547916925479261-
GWHAAZE00000005CDS2547899525479087-
GWHAAZE00000005CDS2547678225476886-
GWHAAZE00000005CDS2547651725476615-
GWHAAZE00000005CDS2547523525475558-
Transcript Sequence

Network for GWHGAAZE018850

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase412356.80E-51
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_OST1L

KEGG pathway

KO Enzyme pathway mapID
K14498SNRK2 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0005524molecular_functionATP binding
GO:0004672molecular_functionprotein kinase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf48.640
SRR3591706second leaf29.743
SRR3591707mature leaf30.387
SRR3591708Shoot apex24.361
SRR3591709Stem57.101
SRR3591710White floral bud87.090
SRR3591711White flower87.074
SRR3591712Green floral bud59.628
SRR3591713Yellow flower69.059
SRP173429 SRR8316895Juvenile bud stage 36.034
SRR8316896Juvenile bud stage 52.000
SRR8316897Juvenile bud stage 40.152
SRR8316894Third green stage 16.080
SRR8316900Third green stage 50.269
SRR8316901Third green stage 59.760
SRR8316898Complete white stage 32.554
SRR8316899Complete white stage 89.599
SRR8316903Complete white stage 46.453
SRR8316902Silver flowering stage33.784
SRR8316904Silver flowering stage50.429
SRR8316905Silver flowering stage23.349
SRR8316906Gold flowering stage 77.991
SRR8316907Gold flowering stage 68.116
SRR8316908Gold flowering stage 74.930
SRP132670SRR6706286Control54.555
SRR6706287Light intensity 50%55.008
SRR6706288Light intensity 20%53.012
CNP0000432CNS0095592Slightly white alabastrum(diploid) 148.564
CNS0095593Slightly white alabastrum(diploid) 273.670
CNS0095594Slightly white alabastrum(diploid) 377.034
CNS0095595Whole white alabastrum(diploid) 273.163
CNS0095596Whole white alabastrum(diploid) 345.247
CNS0095597Whole white alabastrum(diploid) 474.389
CNS0095598Silvery flower (diploied) 162.791
CNS0095599Silvery flower (diploied) 276.667
CNS0095600Silvery flower (diploied) 382.455
CNS0095601Golden flower (diploid) 165.495
CNS0095602Golden flower (diploid) 276.667
CNS0095603Golden flower (diploid) 374.481
CNS0095604Slightly white alabastrum(tetraploid) 146.441
CNS0095605Slightly white alabastrum(tetraploid) 245.112
CNS0095606Slightly white alabastrum(tetraploid) 356.735
CNS0095607Whole white alabastrum(tetraploid) 176.780
CNS0095608Whole white alabastrum(tetraploid) 286.072
CNS0095609Whole white alabastrum(tetraploid) 365.959
CNS0095610Silvery flower (tetraploid) 189.169
CNS0095611Silvery flower (tetraploid) 287.982
CNS0095612Silvery flower (tetraploid) 393.779
CNS0095613Golden flower (tetraploid) 152.649
CNS0095614Golden flower (tetraploid) 262.545
CNS0095615Golden flower (tetraploid) 378.583
CRA001975CRR073297Stem 159.634
CRR073298Stem 252.520
CRR073299Stem 349.549
CRR073300Leaf 185.527
CRR073301Leaf 297.493
CRR073302Leaf 362.292
CRR073303Juvenile bud 1126.948
CRR073304Juvenile bud 287.740
CRR073305Juvenile bud 3104.885
CRR073306Third green 1109.582
CRR073307Third green 2121.229
CRR073308Third green 3114.423
CRR073309Second white 1101.846
CRR073310Second white 2141.697
CRR073311Second white 3106.756
CRR073312Silver flowering 1102.091
CRR073313Silver flowering 287.590
CRR073314Silver flowering 3101.078
CRR073315Gold flowering 133.443
CRR073316Gold flowering 241.624
CRR073317Gold flowering 317.592
CRR073318Tawny withering 161.181
CRR073319Tawny withering 267.885
CRR073320Tawny withering 364.470