Detail information of GWHGAAZE018908


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002279101.10PREDICTED: stromal 70 kDa heat shock-related protein, chloroplastic [Vitis vinifera]
Swissprottr|Q02028|HSP7S_PEA0Stromal 70 kDa heat shock-related protein, chloroplastic (Precursor)
trEMBLtr|F6GTP0|F6GTP0_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB43236.1}
TAIR10AT5G49910.10chloroplast heat shock protein 70-2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene2671803126722092-
GWHAAZE00000005mRNA2671803126722092-
GWHAAZE00000005exon2672188626722092-
GWHAAZE00000005exon2672135026721694-
GWHAAZE00000005exon2672015426720406-
GWHAAZE00000005exon2671933426719413-
GWHAAZE00000005exon2671908726719229-
GWHAAZE00000005exon2671890726719005-
GWHAAZE00000005exon2671858326718772-
GWHAAZE00000005exon2671803126718435-
GWHAAZE00000005CDS2672188626722092-
GWHAAZE00000005CDS2672135026721694-
GWHAAZE00000005CDS2672015426720406-
GWHAAZE00000005CDS2671933426719413-
GWHAAZE00000005CDS2671908726719229-
GWHAAZE00000005CDS2671890726719005-
GWHAAZE00000005CDS2671858326718772-
GWHAAZE00000005CDS2671803126718435-
Transcript Sequence

Network for GWHGAAZE018908

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00012.21HSP70705734.10E-235
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03283HSPA1s Spliceosome map03040
Protein processing in endoplasmic reticulummap04141
MAPK signaling pathwaymap04010
Endocytosismap04144
Antigen processing and presentationmap04612
Estrogen signaling pathwaymap04915
Longevity regulating pathway - multiple speciesmap04213

Gene Ontology

GO term OntologyName
GO:0006457biological_processprotein folding
GO:0005524molecular_functionATP binding
GO:0051082molecular_functionunfolded protein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf121.348
SRR3591706second leaf85.269
SRR3591707mature leaf45.304
SRR3591708Shoot apex155.674
SRR3591709Stem68.743
SRR3591710White floral bud121.900
SRR3591711White flower211.597
SRR3591712Green floral bud143.588
SRR3591713Yellow flower228.395
SRP173429 SRR8316895Juvenile bud stage 136.933
SRR8316896Juvenile bud stage 184.483
SRR8316897Juvenile bud stage 103.348
SRR8316894Third green stage 62.129
SRR8316900Third green stage 252.927
SRR8316901Third green stage 177.929
SRR8316898Complete white stage 71.515
SRR8316899Complete white stage 180.392
SRR8316903Complete white stage 114.069
SRR8316902Silver flowering stage101.862
SRR8316904Silver flowering stage155.048
SRR8316905Silver flowering stage88.766
SRR8316906Gold flowering stage 310.311
SRR8316907Gold flowering stage 309.775
SRR8316908Gold flowering stage 399.979
SRP132670SRR6706286Control186.927
SRR6706287Light intensity 50%187.613
SRR6706288Light intensity 20%196.677
CNP0000432CNS0095592Slightly white alabastrum(diploid) 174.878
CNS0095593Slightly white alabastrum(diploid) 273.296
CNS0095594Slightly white alabastrum(diploid) 361.678
CNS0095595Whole white alabastrum(diploid) 278.010
CNS0095596Whole white alabastrum(diploid) 368.595
CNS0095597Whole white alabastrum(diploid) 457.813
CNS0095598Silvery flower (diploied) 1114.447
CNS0095599Silvery flower (diploied) 2129.998
CNS0095600Silvery flower (diploied) 3310.396
CNS0095601Golden flower (diploid) 1145.525
CNS0095602Golden flower (diploid) 2283.929
CNS0095603Golden flower (diploid) 3278.474
CNS0095604Slightly white alabastrum(tetraploid) 1115.748
CNS0095605Slightly white alabastrum(tetraploid) 284.300
CNS0095606Slightly white alabastrum(tetraploid) 3299.628
CNS0095607Whole white alabastrum(tetraploid) 140.883
CNS0095608Whole white alabastrum(tetraploid) 234.428
CNS0095609Whole white alabastrum(tetraploid) 3261.313
CNS0095610Silvery flower (tetraploid) 1306.454
CNS0095611Silvery flower (tetraploid) 2427.677
CNS0095612Silvery flower (tetraploid) 3457.557
CNS0095613Golden flower (tetraploid) 1184.773
CNS0095614Golden flower (tetraploid) 2319.246
CNS0095615Golden flower (tetraploid) 3414.142
CRA001975CRR073297Stem 1222.083
CRR073298Stem 2209.361
CRR073299Stem 3231.338
CRR073300Leaf 1193.789
CRR073301Leaf 2178.440
CRR073302Leaf 3269.931
CRR073303Juvenile bud 1238.728
CRR073304Juvenile bud 2228.046
CRR073305Juvenile bud 3191.644
CRR073306Third green 1136.435
CRR073307Third green 270.685
CRR073308Third green 399.710
CRR073309Second white 1473.487
CRR073310Second white 2321.820
CRR073311Second white 3412.507
CRR073312Silver flowering 1351.600
CRR073313Silver flowering 2333.742
CRR073314Silver flowering 3264.683
CRR073315Gold flowering 1181.591
CRR073316Gold flowering 2248.984
CRR073317Gold flowering 3195.666
CRR073318Tawny withering 178.239
CRR073319Tawny withering 244.675
CRR073320Tawny withering 398.245