Detail information of GWHGAAZE018961


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004503952.12.08751E-08PREDICTED: protein MKS1-like [Cicer arietinum]
Swissprottr|Q8LGD5|MKS1_ARATH0.000001Protein MKS1
trEMBLtr|A0A068U911|A0A068U911_COFCA0.00000004Coffea canephora DH200=94 genomic scaffold, scaffold_13 {ECO:0000313|EMBL:CDP04747.1}
TAIR10AT3G18690.10.001MAP kinase substrate 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene2783468027835084+
GWHAAZE00000005mRNA2783468027835084+
GWHAAZE00000005exon2783468027835084+
GWHAAZE00000005CDS2783468027835084+
Transcript Sequence

Network for GWHGAAZE018961

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K20725MKS1 MAPK signaling pathway - plant map04016

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.996
SRR3591706second leaf2.038
SRR3591707mature leaf2.111
SRR3591708Shoot apex2.931
SRR3591709Stem1.905
SRR3591710White floral bud1.971
SRR3591711White flower1.107
SRR3591712Green floral bud1.934
SRR3591713Yellow flower0.928
SRP173429 SRR8316895Juvenile bud stage 0.362
SRR8316896Juvenile bud stage 0.358
SRR8316897Juvenile bud stage 1.146
SRR8316894Third green stage 0.000
SRR8316900Third green stage 0.935
SRR8316901Third green stage 0.756
SRR8316898Complete white stage 0.319
SRR8316899Complete white stage 0.409
SRR8316903Complete white stage 0.507
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.461
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.160
SRR8316907Gold flowering stage 0.678
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control1.043
SRR6706287Light intensity 50%2.121
SRR6706288Light intensity 20%1.665
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.280
CNS0095593Slightly white alabastrum(diploid) 20.480
CNS0095594Slightly white alabastrum(diploid) 30.691
CNS0095595Whole white alabastrum(diploid) 21.927
CNS0095596Whole white alabastrum(diploid) 32.896
CNS0095597Whole white alabastrum(diploid) 44.660
CNS0095598Silvery flower (diploied) 10.453
CNS0095599Silvery flower (diploied) 20.158
CNS0095600Silvery flower (diploied) 30.720
CNS0095601Golden flower (diploid) 10.115
CNS0095602Golden flower (diploid) 20.383
CNS0095603Golden flower (diploid) 30.132
CNS0095604Slightly white alabastrum(tetraploid) 13.919
CNS0095605Slightly white alabastrum(tetraploid) 22.562
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 15.308
CNS0095608Whole white alabastrum(tetraploid) 27.142
CNS0095609Whole white alabastrum(tetraploid) 33.934
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.259
CNS0095612Silvery flower (tetraploid) 31.170
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 31.019
CRA001975CRR073297Stem 10.407
CRR073298Stem 20.145
CRR073299Stem 30.325
CRR073300Leaf 11.154
CRR073301Leaf 20.312
CRR073302Leaf 30.334
CRR073303Juvenile bud 10.313
CRR073304Juvenile bud 20.152
CRR073305Juvenile bud 30.000
CRR073306Third green 10.236
CRR073307Third green 20.000
CRR073308Third green 30.289
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.440
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.033
CRR073317Gold flowering 30.186
CRR073318Tawny withering 11.208
CRR073319Tawny withering 20.225
CRR073320Tawny withering 30.238