Detail information of GWHGAAZE018963


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007037693.18.06029E-67NB-ARC domain-containing disease resistance protein, putative isoform 1 [Theobroma cacao]
Swissprottr|Q9T048|DRL27_ARATH9E-14Disease resistance protein At4g27190
trEMBLtr|A0A061G5B3|A0A061G5B3_THECC3E-67NB-ARC domain-containing disease resistance protein, putative isoform 1 {ECO:0000313|EMBL:EOY22194.1}
TAIR10AT4G27190.13E-13NB-ARC domain-containing disease resistance protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene2785612427857224-
GWHAAZE00000005mRNA2785612427857224-
GWHAAZE00000005exon2785612427857224-
GWHAAZE00000005CDS2785612427857224-
Transcript Sequence

Network for GWHGAAZE018963

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13459RPS2 Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf15.711
SRR3591706second leaf4.780
SRR3591707mature leaf6.378
SRR3591708Shoot apex9.598
SRR3591709Stem15.256
SRR3591710White floral bud15.132
SRR3591711White flower12.673
SRR3591712Green floral bud18.728
SRR3591713Yellow flower11.326
SRP173429 SRR8316895Juvenile bud stage 2.083
SRR8316896Juvenile bud stage 1.578
SRR8316897Juvenile bud stage 3.032
SRR8316894Third green stage 0.988
SRR8316900Third green stage 3.233
SRR8316901Third green stage 2.545
SRR8316898Complete white stage 1.351
SRR8316899Complete white stage 4.562
SRR8316903Complete white stage 4.086
SRR8316902Silver flowering stage0.791
SRR8316904Silver flowering stage1.260
SRR8316905Silver flowering stage0.634
SRR8316906Gold flowering stage 1.785
SRR8316907Gold flowering stage 1.434
SRR8316908Gold flowering stage 2.736
SRP132670SRR6706286Control1.409
SRR6706287Light intensity 50%1.406
SRR6706288Light intensity 20%1.936
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.480
CNS0095593Slightly white alabastrum(diploid) 22.088
CNS0095594Slightly white alabastrum(diploid) 32.031
CNS0095595Whole white alabastrum(diploid) 21.343
CNS0095596Whole white alabastrum(diploid) 30.964
CNS0095597Whole white alabastrum(diploid) 42.075
CNS0095598Silvery flower (diploied) 11.646
CNS0095599Silvery flower (diploied) 22.110
CNS0095600Silvery flower (diploied) 32.280
CNS0095601Golden flower (diploid) 11.346
CNS0095602Golden flower (diploid) 21.703
CNS0095603Golden flower (diploid) 32.289
CNS0095604Slightly white alabastrum(tetraploid) 13.859
CNS0095605Slightly white alabastrum(tetraploid) 23.971
CNS0095606Slightly white alabastrum(tetraploid) 32.603
CNS0095607Whole white alabastrum(tetraploid) 15.692
CNS0095608Whole white alabastrum(tetraploid) 24.130
CNS0095609Whole white alabastrum(tetraploid) 35.910
CNS0095610Silvery flower (tetraploid) 12.525
CNS0095611Silvery flower (tetraploid) 24.261
CNS0095612Silvery flower (tetraploid) 39.451
CNS0095613Golden flower (tetraploid) 10.887
CNS0095614Golden flower (tetraploid) 21.577
CNS0095615Golden flower (tetraploid) 31.020
CRA001975CRR073297Stem 11.310
CRR073298Stem 21.288
CRR073299Stem 30.732
CRR073300Leaf 12.957
CRR073301Leaf 22.303
CRR073302Leaf 31.922
CRR073303Juvenile bud 12.059
CRR073304Juvenile bud 22.486
CRR073305Juvenile bud 32.324
CRR073306Third green 10.737
CRR073307Third green 20.992
CRR073308Third green 30.479
CRR073309Second white 11.223
CRR073310Second white 22.582
CRR073311Second white 31.663
CRR073312Silver flowering 11.607
CRR073313Silver flowering 21.792
CRR073314Silver flowering 30.857
CRR073315Gold flowering 10.518
CRR073316Gold flowering 20.275
CRR073317Gold flowering 30.487
CRR073318Tawny withering 12.449
CRR073319Tawny withering 21.255
CRR073320Tawny withering 31.818