Gene detail

Detail information of GWHGAAZE019022

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_008372815.1	7.18649E-85	PREDICTED: uncharacterized protein LOC103436170 [Malus domestica]
trEMBL	tr\|A5B8Q2\|A5B8Q2_VITVI	2E-10	Putative uncharacterized protein {ECO:0000313\|EMBL:CAN78763.1}

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	29532064	29534125	+
GWHAAZE00000005	mRNA	29532064	29534125	+
GWHAAZE00000005	exon	29532064	29532101	+
GWHAAZE00000005	exon	29532199	29532340	+
GWHAAZE00000005	exon	29532435	29532533	+
GWHAAZE00000005	exon	29533432	29533524	+
GWHAAZE00000005	exon	29533627	29534125	+
GWHAAZE00000005	CDS	29532064	29532101	+
GWHAAZE00000005	CDS	29532199	29532340	+
GWHAAZE00000005	CDS	29532435	29532533	+
GWHAAZE00000005	CDS	29533432	29533524	+
GWHAAZE00000005	CDS	29533627	29533977	+
GWHAAZE00000005	three_prime_UTR	29533978	29534125	+

Transcript Sequence
>GWHTAAZE019044 ATGCTGCTTGATTTTGGTTATTCATGCAGTTTTCATGAGGAGTTCAAGTTTGAGTTGCATGATTACTACTTAGAGTTTGAGTCTCCCGATGAAGCATTAGTTAATCCCCCTATAGAGATGGACACGAGACCAGGGCAATGGGAGCTTCTGTGTAAACATTTTCAATTAGACCGGTTTTTGAAACAATCGACTGCTAACAAGATTAACCAAGCAAAGAGGCCGTATGAACATCACGCTGGCTCATGCCCACTAGCCTACATAGTGGAGGAGTGCGCTGAGGCGGGATCCCAATTTCTAGAGATTGATACATTTGAGATAGCTTATGGTGGAAAGAACAAGAATATTACCAACGATATTGCTAAGGCTAAATTTGATGAGATGGTGGCGAAGAAGGATGTGTATATGAAGGAATTAGCAAAAGATTATCCTGAGGGTACACCATTAAATGAAATAGTACCAGACAAAGACATTGGAGTTAATATCATAACAAATGTACTAGGTCTTAACATCGGTAAGGAGTTTCGTGGATTGGGAGCTAGTCGAGTTTGTGACCTTAAAGGATCATCATTGAGAGCTCGACAATTGGAGGAGCAGTTGGCAGCTGAGAGAGCAGCATGCCAAGTAGCAGACGAAAGATTGAATGTAGCTACGCAGCTCATGAGAAAGCCCAACAACGTCTTGAATTTTTCATGCAATCATGGGAGCAAACTATGCAGCAACTAGCACAACAACTCCCTGGGTTTGTACCTCCCCCAATGATACCACACACTACAGATTCTGATTAACGTGTGCGTGAAGCCGAGGAAGATGTAAATGTTTAGTAGACTTATTTTTGTTTGGACATTATTAGCTTTTGGAATGATTTAGATAG

Network for GWHGAAZE019022

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0020

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.384
	SRR3591706	second leaf	0.223
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.103
	SRR3591709	Stem	1.697
	SRR3591710	White floral bud	1.942
	SRR3591711	White flower	4.396
	SRR3591712	Green floral bud	0.614
	SRR3591713	Yellow flower	0.054
SRP173429	SRR8316895	Juvenile bud stage	0.000
	SRR8316896	Juvenile bud stage	0.000
	SRR8316897	Juvenile bud stage	0.325
	SRR8316894	Third green stage	0.000
	SRR8316900	Third green stage	0.000
	SRR8316901	Third green stage	0.000
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.000
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.122
SRP132670	SRR6706286	Control	0.000
	SRR6706287	Light intensity 50%	0.000
	SRR6706288	Light intensity 20%	0.000
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.000
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	0.000
	CNS0095595	Whole white alabastrum(diploid) 2	0.000
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.000
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.000
	CNS0095600	Silvery flower (diploied) 3	0.000
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.000
	CNS0095603	Golden flower (diploid) 3	0.000
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.179
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.980
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.838
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.563
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.185
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.060
	CNS0095610	Silvery flower (tetraploid) 1	0.705
	CNS0095611	Silvery flower (tetraploid) 2	0.193
	CNS0095612	Silvery flower (tetraploid) 3	0.414
	CNS0095613	Golden flower (tetraploid) 1	0.438
	CNS0095614	Golden flower (tetraploid) 2	0.139
	CNS0095615	Golden flower (tetraploid) 3	0.225
CRA001975	CRR073297	Stem 1	0.000
	CRR073298	Stem 2	0.000
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	0.000
	CRR073301	Leaf 2	0.000
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000