Detail information of GWHGAAZE019051


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009612147.16.8066E-111PREDICTED: glutathione S-transferase zeta class-like [Nicotiana tomentosiformis]
Swissprottr|P57108|GSTZ_EUPES6E-104Glutathione S-transferase zeta class
trEMBLtr|B9N0M0|B9N0M0_POPTR9E-111Zeta class glutathione transferase GSTZ2 {ECO:0000313|EMBL:ADB11340.1}
TAIR10AT2G02390.12E-73glutathione S-transferase zeta 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene3079821430805577-
GWHAAZE00000005mRNA3079821430805577-
GWHAAZE00000005exon3080547530805577-
GWHAAZE00000005exon3080455130804607-
GWHAAZE00000005exon3080289530802980-
GWHAAZE00000005exon3080225030802321-
GWHAAZE00000005exon3080050030800553-
GWHAAZE00000005exon3080032730800402-
GWHAAZE00000005exon3080000930800070-
GWHAAZE00000005exon3079897930799038-
GWHAAZE00000005exon3079865230798763-
GWHAAZE00000005exon3079821430798483-
GWHAAZE00000005CDS3080547530805577-
GWHAAZE00000005CDS3080455130804607-
GWHAAZE00000005CDS3080289530802980-
GWHAAZE00000005CDS3080225030802321-
GWHAAZE00000005CDS3080050030800553-
GWHAAZE00000005CDS3080032730800402-
GWHAAZE00000005CDS3080000930800070-
GWHAAZE00000005CDS3079897930799038-
GWHAAZE00000005CDS3079865330798763-
GWHAAZE00000005three_prime_UTR3079865230798652-
GWHAAZE00000005three_prime_UTR3079821430798483-
Transcript Sequence

Network for GWHGAAZE019051

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0231


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02798.21GST_N12851.40E-17
PF14497.7GST_C_31392103.60E-05
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01800maiA, GSTZ1 Metabolic pathways map01100
Microbial metabolism in diverse environmentsmap01120
Tyrosine metabolismmap00350
Styrene degradationmap00643

Gene Ontology

GO term OntologyName
GO:0009072biological_processaromatic amino acid family metabolic process
GO:0005737cellular_componentcytoplasm
GO:0003824molecular_functioncatalytic activity
GO:0005515molecular_functionprotein binding

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE019051.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 301020302.557.512.51517.522.52527.5Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.483
SRR3591707mature leaf0.000
SRR3591708Shoot apex1.394
SRR3591709Stem0.000
SRR3591710White floral bud2.632
SRR3591711White flower1.101
SRR3591712Green floral bud4.601
SRR3591713Yellow flower0.372
SRP173429 SRR8316895Juvenile bud stage 2.514
SRR8316896Juvenile bud stage 3.078
SRR8316897Juvenile bud stage 0.985
SRR8316894Third green stage 1.356
SRR8316900Third green stage 2.544
SRR8316901Third green stage 3.151
SRR8316898Complete white stage 0.186
SRR8316899Complete white stage 3.552
SRR8316903Complete white stage 0.808
SRR8316902Silver flowering stage0.044
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.067
SRR8316906Gold flowering stage 0.042
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.178
SRP132670SRR6706286Control0.741
SRR6706287Light intensity 50%0.732
SRR6706288Light intensity 20%0.454
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.852
CNS0095593Slightly white alabastrum(diploid) 25.953
CNS0095594Slightly white alabastrum(diploid) 314.574
CNS0095595Whole white alabastrum(diploid) 29.180
CNS0095596Whole white alabastrum(diploid) 36.402
CNS0095597Whole white alabastrum(diploid) 45.984
CNS0095598Silvery flower (diploied) 127.051
CNS0095599Silvery flower (diploied) 213.120
CNS0095600Silvery flower (diploied) 34.899
CNS0095601Golden flower (diploid) 127.389
CNS0095602Golden flower (diploid) 211.766
CNS0095603Golden flower (diploid) 39.297
CNS0095604Slightly white alabastrum(tetraploid) 16.613
CNS0095605Slightly white alabastrum(tetraploid) 26.960
CNS0095606Slightly white alabastrum(tetraploid) 35.353
CNS0095607Whole white alabastrum(tetraploid) 18.148
CNS0095608Whole white alabastrum(tetraploid) 24.476
CNS0095609Whole white alabastrum(tetraploid) 32.368
CNS0095610Silvery flower (tetraploid) 10.030
CNS0095611Silvery flower (tetraploid) 21.906
CNS0095612Silvery flower (tetraploid) 30.413
CNS0095613Golden flower (tetraploid) 10.047
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 11.264
CRR073298Stem 21.086
CRR073299Stem 30.635
CRR073300Leaf 10.622
CRR073301Leaf 21.133
CRR073302Leaf 30.442
CRR073303Juvenile bud 10.948
CRR073304Juvenile bud 20.211
CRR073305Juvenile bud 30.000
CRR073306Third green 10.071
CRR073307Third green 20.151
CRR073308Third green 30.297
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.574
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.249
CRR073316Gold flowering 20.104
CRR073317Gold flowering 30.333
CRR073318Tawny withering 10.091
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000