Gene detail

Detail information of GWHGAAZE019051

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009612147.1	6.8066E-111	PREDICTED: glutathione S-transferase zeta class-like [Nicotiana tomentosiformis]
Swissprot	tr\|P57108\|GSTZ_EUPES	6E-104	Glutathione S-transferase zeta class
trEMBL	tr\|B9N0M0\|B9N0M0_POPTR	9E-111	Zeta class glutathione transferase GSTZ2 {ECO:0000313\|EMBL:ADB11340.1}
TAIR10	AT2G02390.1	2E-73	glutathione S-transferase zeta 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	30798214	30805577	-
GWHAAZE00000005	mRNA	30798214	30805577	-
GWHAAZE00000005	exon	30805475	30805577	-
GWHAAZE00000005	exon	30804551	30804607	-
GWHAAZE00000005	exon	30802895	30802980	-
GWHAAZE00000005	exon	30802250	30802321	-
GWHAAZE00000005	exon	30800500	30800553	-
GWHAAZE00000005	exon	30800327	30800402	-
GWHAAZE00000005	exon	30800009	30800070	-
GWHAAZE00000005	exon	30798979	30799038	-
GWHAAZE00000005	exon	30798652	30798763	-
GWHAAZE00000005	exon	30798214	30798483	-
GWHAAZE00000005	CDS	30805475	30805577	-
GWHAAZE00000005	CDS	30804551	30804607	-
GWHAAZE00000005	CDS	30802895	30802980	-
GWHAAZE00000005	CDS	30802250	30802321	-
GWHAAZE00000005	CDS	30800500	30800553	-
GWHAAZE00000005	CDS	30800327	30800402	-
GWHAAZE00000005	CDS	30800009	30800070	-
GWHAAZE00000005	CDS	30798979	30799038	-
GWHAAZE00000005	CDS	30798653	30798763	-
GWHAAZE00000005	three_prime_UTR	30798652	30798652	-
GWHAAZE00000005	three_prime_UTR	30798214	30798483	-

Transcript Sequence
>GWHTAAZE019073 GGGAGCATTGGTGGCAGTGGAGAGGAGACAAAGAAGCTGAAACTGTATTCTAATTGGCGAAGCTCTTGTTCTTGGCGTGTCCGTATTGCTCTTAACTTGAAAGGAGTAAAATACGAGTACGAAACTGTTGACTTGGCCAAAAAAGAGCACTTGACTCCCGGGTTTCTGAAGCTCAACCCCTTGGGTTTTGTGCCGGTACTGGTGGACAACGGAGTAATAGTTTCCGACTCTTTTGCCATTTTAATGTATCTCGAAGAGAAGTATCATCAACATCCATTGTTGCCTCGTGATCTCCAAACAAGGGCCATCAATTACCAGGCGGCAAGTATTGTTTCCTCAAGCATACAGCCTCTTCAGAATGTACCTCTAGTGAAATATGTTGAGGAGAATATTACTCCTAATGGGAAGCTTCCTTGGGCTCAATATCATATTCGCAAAGGCTTTGCCGCTCTTGAGAAGCTATTGAAAGACTATGCCGGAAAATATGCCACTGGAGATGAAGTTTTCCTGGCTGATTTGTTTCTAGCACCCCAGATCTATGGAGCAATCAAGAGGTTCAATGTTGACATGACAGAGTTCCCCTTACTGTCAAAGTTGAACGAGGCTTATGCAGAGCTACCAGCTTTCCAGGATGCTATGCCAGAAAAGCAACCAGATGCAAGAGCTGATGTAATTTATTAAGATTACTCTTTCCATTCCGCAAAATTGAAGCAGAGAACTATTGAATAGCCTCTCAAGAAGCAAGTTGGATTGTACATCATACAACTCCTTGGTTGTAAGAGTACAAGTAATAAATAAAACAGACTGGTATATATTGTTGTTGTATGGCTTGAAAGATTCAAGTTCTTCTTGAATCCTATGTAATTTGTCTAGATTTTGTTGTTTGTTCTTTGTACTAATTAATGAAGTATTCCTAGCGCTGGTGGTAATATAATATTAGCTGGGTTCTACC

Network for GWHGAAZE019051

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0231

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02798.21	GST_N	12	85	1.40E-17
PF14497.7	GST_C_3	139	210	3.60E-05

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01800	maiA, GSTZ1	Metabolic pathways	map01100
		Microbial metabolism in diverse environments	map01120
		Tyrosine metabolism	map00350
		Styrene degradation	map00643

Gene Ontology

GO term	Ontology	Name
GO:0009072	biological_process	aromatic amino acid family metabolic process
GO:0005737	cellular_component	cytoplasm
GO:0003824	molecular_function	catalytic activity
GO:0005515	molecular_function	protein binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.483
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	1.394
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	2.632
	SRR3591711	White flower	1.101
	SRR3591712	Green floral bud	4.601
	SRR3591713	Yellow flower	0.372
SRP173429	SRR8316895	Juvenile bud stage	2.514
	SRR8316896	Juvenile bud stage	3.078
	SRR8316897	Juvenile bud stage	0.985
	SRR8316894	Third green stage	1.356
	SRR8316900	Third green stage	2.544
	SRR8316901	Third green stage	3.151
	SRR8316898	Complete white stage	0.186
	SRR8316899	Complete white stage	3.552
	SRR8316903	Complete white stage	0.808
	SRR8316902	Silver flowering stage	0.044
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.067
	SRR8316906	Gold flowering stage	0.042
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.178
SRP132670	SRR6706286	Control	0.741
	SRR6706287	Light intensity 50%	0.732
	SRR6706288	Light intensity 20%	0.454
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	7.852
	CNS0095593	Slightly white alabastrum(diploid) 2	5.953
	CNS0095594	Slightly white alabastrum(diploid) 3	14.574
	CNS0095595	Whole white alabastrum(diploid) 2	9.180
	CNS0095596	Whole white alabastrum(diploid) 3	6.402
	CNS0095597	Whole white alabastrum(diploid) 4	5.984
	CNS0095598	Silvery flower (diploied) 1	27.051
	CNS0095599	Silvery flower (diploied) 2	13.120
	CNS0095600	Silvery flower (diploied) 3	4.899
	CNS0095601	Golden flower (diploid) 1	27.389
	CNS0095602	Golden flower (diploid) 2	11.766
	CNS0095603	Golden flower (diploid) 3	9.297
	CNS0095604	Slightly white alabastrum(tetraploid) 1	6.613
	CNS0095605	Slightly white alabastrum(tetraploid) 2	6.960
	CNS0095606	Slightly white alabastrum(tetraploid) 3	5.353
	CNS0095607	Whole white alabastrum(tetraploid) 1	8.148
	CNS0095608	Whole white alabastrum(tetraploid) 2	4.476
	CNS0095609	Whole white alabastrum(tetraploid) 3	2.368
	CNS0095610	Silvery flower (tetraploid) 1	0.030
	CNS0095611	Silvery flower (tetraploid) 2	1.906
	CNS0095612	Silvery flower (tetraploid) 3	0.413
	CNS0095613	Golden flower (tetraploid) 1	0.047
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	1.264
	CRR073298	Stem 2	1.086
	CRR073299	Stem 3	0.635
	CRR073300	Leaf 1	0.622
	CRR073301	Leaf 2	1.133
	CRR073302	Leaf 3	0.442
	CRR073303	Juvenile bud 1	0.948
	CRR073304	Juvenile bud 2	0.211
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.071
	CRR073307	Third green 2	0.151
	CRR073308	Third green 3	0.297
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.574
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.249
	CRR073316	Gold flowering 2	0.104
	CRR073317	Gold flowering 3	0.333
	CRR073318	Tawny withering 1	0.091
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000