Detail information of GWHGAAZE019089


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008775173.11.26235E-22PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein DDB_G0274915-like [Phoenix dactylifera]
Swissprottr|Q8RY25|NU98A_ARATH8E-15Nuclear pore complex protein NUP98A {ECO:0000303|PubMed:21189294}
trEMBLtr|W1P2F0|W1P2F0_AMBTC4E-22Uncharacterized protein {ECO:0000313|EMBL:ERN02093.1} (Fragment)
TAIR10AT1G10390.20.0000006Nucleoporin autopeptidase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene3151672131519689-
GWHAAZE00000005mRNA3151672131519689-
GWHAAZE00000005exon3151672131516955-
GWHAAZE00000005exon3151703631517228-
GWHAAZE00000005exon3151837331518606-
GWHAAZE00000005exon3151954131519689-
GWHAAZE00000005five_prime_UTR3151956331519689-
GWHAAZE00000005CDS3151954131519562-
GWHAAZE00000005CDS3151837331518606-
GWHAAZE00000005CDS3151703631517228-
GWHAAZE00000005CDS3151672131516955-
Transcript Sequence

Network for GWHGAAZE019089

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K14297NUP98, ADAR2, NUP116 RNA transport map03013

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf6.101
SRR3591706second leaf3.538
SRR3591707mature leaf8.520
SRR3591708Shoot apex3.144
SRR3591709Stem8.242
SRR3591710White floral bud5.525
SRR3591711White flower19.376
SRR3591712Green floral bud3.428
SRR3591713Yellow flower5.480
SRP173429 SRR8316895Juvenile bud stage 7.699
SRR8316896Juvenile bud stage 11.744
SRR8316897Juvenile bud stage 5.199
SRR8316894Third green stage 2.005
SRR8316900Third green stage 3.285
SRR8316901Third green stage 4.000
SRR8316898Complete white stage 0.781
SRR8316899Complete white stage 4.716
SRR8316903Complete white stage 2.130
SRR8316902Silver flowering stage8.526
SRR8316904Silver flowering stage9.213
SRR8316905Silver flowering stage1.209
SRR8316906Gold flowering stage 3.422
SRR8316907Gold flowering stage 3.575
SRR8316908Gold flowering stage 2.357
SRP132670SRR6706286Control1.796
SRR6706287Light intensity 50%2.187
SRR6706288Light intensity 20%1.810
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.936
CNS0095593Slightly white alabastrum(diploid) 21.105
CNS0095594Slightly white alabastrum(diploid) 31.794
CNS0095595Whole white alabastrum(diploid) 21.642
CNS0095596Whole white alabastrum(diploid) 30.854
CNS0095597Whole white alabastrum(diploid) 42.299
CNS0095598Silvery flower (diploied) 15.010
CNS0095599Silvery flower (diploied) 23.033
CNS0095600Silvery flower (diploied) 36.385
CNS0095601Golden flower (diploid) 13.801
CNS0095602Golden flower (diploid) 24.500
CNS0095603Golden flower (diploid) 36.446
CNS0095604Slightly white alabastrum(tetraploid) 11.428
CNS0095605Slightly white alabastrum(tetraploid) 21.664
CNS0095606Slightly white alabastrum(tetraploid) 33.563
CNS0095607Whole white alabastrum(tetraploid) 10.642
CNS0095608Whole white alabastrum(tetraploid) 20.743
CNS0095609Whole white alabastrum(tetraploid) 31.124
CNS0095610Silvery flower (tetraploid) 15.169
CNS0095611Silvery flower (tetraploid) 24.133
CNS0095612Silvery flower (tetraploid) 33.304
CNS0095613Golden flower (tetraploid) 12.007
CNS0095614Golden flower (tetraploid) 22.320
CNS0095615Golden flower (tetraploid) 35.784
CRA001975CRR073297Stem 13.246
CRR073298Stem 24.262
CRR073299Stem 30.095
CRR073300Leaf 12.116
CRR073301Leaf 22.848
CRR073302Leaf 30.416
CRR073303Juvenile bud 10.705
CRR073304Juvenile bud 20.729
CRR073305Juvenile bud 31.307
CRR073306Third green 11.165
CRR073307Third green 22.077
CRR073308Third green 30.166
CRR073309Second white 11.753
CRR073310Second white 22.083
CRR073311Second white 31.821
CRR073312Silver flowering 14.200
CRR073313Silver flowering 22.727
CRR073314Silver flowering 31.998
CRR073315Gold flowering 11.216
CRR073316Gold flowering 23.034
CRR073317Gold flowering 30.037
CRR073318Tawny withering 10.826
CRR073319Tawny withering 21.191
CRR073320Tawny withering 30.859