Gene detail

Detail information of GWHGAAZE019137

Functional Annotation

Database	Orthologs	Annotation
Nr	KDP23353.1	hypothetical protein JCGZ_23186 [Jatropha curcas]
Swissprot	tr\|Q93ZW0\|G6PD4_ARATH	Glucose-6-phosphate 1-dehydrogenase 4, chloroplastic (Precursor)
trEMBL	tr\|A0A067JKL6\|A0A067JKL6_JATCU	Glucose-6-phosphate 1-dehydrogenase {ECO:0000256\|RuleBase:RU000497}
TAIR10	AT1G09420.1	glucose-6-phosphate dehydrogenase 4

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	32400856	32409976	+
GWHAAZE00000005	mRNA	32400856	32409976	+
GWHAAZE00000005	exon	32400856	32401026	+
GWHAAZE00000005	exon	32401680	32401774	+
GWHAAZE00000005	exon	32402521	32402635	+
GWHAAZE00000005	exon	32402749	32402954	+
GWHAAZE00000005	exon	32403450	32403558	+
GWHAAZE00000005	exon	32403648	32403688	+
GWHAAZE00000005	exon	32404101	32404266	+
GWHAAZE00000005	exon	32404353	32404558	+
GWHAAZE00000005	exon	32408793	32408993	+
GWHAAZE00000005	exon	32409739	32409976	+
GWHAAZE00000005	CDS	32400856	32401026	+
GWHAAZE00000005	CDS	32401680	32401774	+
GWHAAZE00000005	CDS	32402521	32402635	+
GWHAAZE00000005	CDS	32402749	32402954	+
GWHAAZE00000005	CDS	32403450	32403558	+
GWHAAZE00000005	CDS	32403648	32403688	+
GWHAAZE00000005	CDS	32404101	32404266	+
GWHAAZE00000005	CDS	32404353	32404558	+
GWHAAZE00000005	CDS	32408793	32408993	+
GWHAAZE00000005	CDS	32409739	32409976	+

Transcript Sequence
>GWHTAAZE019159 ATGGTAAAAAATGCAGCCTCTATTGAATCTCATTCATCTTCGTTACAAAGTCATTCCTCTGGTAGACCACCCGCTCTTTGCATTGCTGTCATTGGGGCTACTGGTGATCTAGCAAGATGGAAGATTTTTCCGGCATTGTTTGCCCTTTACTACAGCGGCTTTCTTCCTGAGAATGTTGCTATTTTTGGTTATTCGAGAAGAAAATTGTCAGATGACGACCTGAGATCCATCATAACATCAACTTTAACTTGCCGCGTTGATTATCAACAAGACTGTGGGAGCAAAATGGATGAATTTCTTAGTAGAACGTACTATATTGACGGAGGCTATGACAATGAAGAAGGGATGTCGATGCTCAATGCTCGGATGGAACAGATTGAGGGGGAGTCTAAAGCCAACAGAGTATTTTACCTTTCTGTGCCCCAAGAAGCACTTCTTGATGTTGCATCCTCTCTTGCTGATAATGCCCAAACTCACAAGGGCTGGAATCGTGTTATAATTGAGAAGCCCTTTGGTTTTGATTCATTGACTTCTCATCAGTTGACTCAATATCTTCTCACCAAATTCACGGAGAACCAATTATATAGGATAGATCATCTTTTGGGAAGGAACATTATTGAAAACATCACTGTTTTAAGATTCTCTAATCTAGTTTTTCAACCTCTATGGAGACGAACTTACATACACAATGTACAGGTCATTCTATCAGAAGATTTTGGTATTCAAACGAGAGAAAGAAATTATTTTGATTCAAGCTTAATTTCATATGCTCCTTTACGCAGATATTTCGAAAGCTATGGGCTTATACGCTACATAGTACATAGTCATCTACTTCAGACCATTGCCTTGCTTGCCATGGAACCGCCCATAAGTTTTGACGGCGAAGATGTTCGAAATGAAAAGGTAAAGGTTTTGAGATCAATCCGGGAACTAGAACATACAGATGTTGTTCTTGGACAGTATAAAGAATGTTCTGAAGATAAGGTTTGTGATGCTCGTTTAAACAATTCAACTCCCACATTCTTTGCAGCTGCTTTACATATTGACAATGCACGTTGGGATGGCGTTCCTTTCTTGATCAAAGCTGGCATGGGTCTAAGCAAACACAGAGTGGAGATACGTATACAATTTCGCCATGTGCCTGGAAACATCTACCGCGATCACATCAGGCATAATGTTGATCTTGCCACAAATGAGCTGATTTTGCGTGATGTGCCCAATGAAGCAATATTAGTCAGAGTAAACAATAAGATTCCAGGATTGGGCTTGTCTTTAGATGCTTCAGAACTGAATTTGCTTTACAAGGACAAGTACAATGGTGAGGTACCGGATTCATATGAACATCTTCTTCACGATGTGATGGACGGCGACAACCACCTATTCATGAGAAGCGATGAGGTCGCAGCTGCATGGGATATTTTATCCCCGGTATTGTGCGATATAGATGAAAACAATGTAGCACCAGAGCCATACGATTTGGGCAGTGGAGGTCCGGTTAAAGCATCCCAGTTGTGGGCAAAACACGGGGTTCAATGGGTGGAGGACTAG

Network for GWHGAAZE019137

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00479.23	G6PD_N	30	208	4.00E-49
PF02781.17	G6PD_C	211	252	2.20E-09
PF02781.17	G6PD_C	261	512	3.80E-76

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00036	G6PD, zwf	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Carbon metabolism	map01200
		Pentose phosphate pathway	map00030
		Glutathione metabolism	map00480

Gene Ontology

GO term	Ontology	Name
GO:0006006	biological_process	glucose metabolic process
GO:0055114	biological_process	oxidation-reduction process
GO:0004345	molecular_function	glucose-6-phosphate dehydrogenase activity
GO:0050661	molecular_function	NADP binding
GO:0016614	molecular_function	oxidoreductase activity, acting on CH-OH group of donors

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	5.546
	SRR3591706	second leaf	3.860
	SRR3591707	mature leaf	7.515
	SRR3591708	Shoot apex	8.008
	SRR3591709	Stem	7.585
	SRR3591710	White floral bud	9.132
	SRR3591711	White flower	8.698
	SRR3591712	Green floral bud	12.020
	SRR3591713	Yellow flower	2.917
SRP173429	SRR8316895	Juvenile bud stage	8.456
	SRR8316896	Juvenile bud stage	11.146
	SRR8316897	Juvenile bud stage	4.592
	SRR8316894	Third green stage	5.223
	SRR8316900	Third green stage	14.150
	SRR8316901	Third green stage	14.353
	SRR8316898	Complete white stage	5.663
	SRR8316899	Complete white stage	19.013
	SRR8316903	Complete white stage	8.098
	SRR8316902	Silver flowering stage	7.957
	SRR8316904	Silver flowering stage	7.294
	SRR8316905	Silver flowering stage	1.043
	SRR8316906	Gold flowering stage	3.468
	SRR8316907	Gold flowering stage	2.854
	SRR8316908	Gold flowering stage	2.244
SRP132670	SRR6706286	Control	21.770
	SRR6706287	Light intensity 50%	19.428
	SRR6706288	Light intensity 20%	20.153
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	4.556
	CNS0095593	Slightly white alabastrum(diploid) 2	5.867
	CNS0095594	Slightly white alabastrum(diploid) 3	4.894
	CNS0095595	Whole white alabastrum(diploid) 2	5.236
	CNS0095596	Whole white alabastrum(diploid) 3	4.344
	CNS0095597	Whole white alabastrum(diploid) 4	3.570
	CNS0095598	Silvery flower (diploied) 1	7.039
	CNS0095599	Silvery flower (diploied) 2	5.241
	CNS0095600	Silvery flower (diploied) 3	7.859
	CNS0095601	Golden flower (diploid) 1	6.190
	CNS0095602	Golden flower (diploid) 2	7.450
	CNS0095603	Golden flower (diploid) 3	7.089
	CNS0095604	Slightly white alabastrum(tetraploid) 1	6.513
	CNS0095605	Slightly white alabastrum(tetraploid) 2	3.919
	CNS0095606	Slightly white alabastrum(tetraploid) 3	13.485
	CNS0095607	Whole white alabastrum(tetraploid) 1	3.105
	CNS0095608	Whole white alabastrum(tetraploid) 2	3.146
	CNS0095609	Whole white alabastrum(tetraploid) 3	12.151
	CNS0095610	Silvery flower (tetraploid) 1	12.303
	CNS0095611	Silvery flower (tetraploid) 2	12.950
	CNS0095612	Silvery flower (tetraploid) 3	6.138
	CNS0095613	Golden flower (tetraploid) 1	1.827
	CNS0095614	Golden flower (tetraploid) 2	3.676
	CNS0095615	Golden flower (tetraploid) 3	0.732
CRA001975	CRR073297	Stem 1	9.425
	CRR073298	Stem 2	7.494
	CRR073299	Stem 3	5.685
	CRR073300	Leaf 1	10.558
	CRR073301	Leaf 2	9.479
	CRR073302	Leaf 3	7.906
	CRR073303	Juvenile bud 1	10.987
	CRR073304	Juvenile bud 2	12.619
	CRR073305	Juvenile bud 3	8.435
	CRR073306	Third green 1	1.056
	CRR073307	Third green 2	2.130
	CRR073308	Third green 3	3.079
	CRR073309	Second white 1	1.487
	CRR073310	Second white 2	1.134
	CRR073311	Second white 3	1.048
	CRR073312	Silver flowering 1	0.139
	CRR073313	Silver flowering 2	0.207
	CRR073314	Silver flowering 3	0.410
	CRR073315	Gold flowering 1	2.262
	CRR073316	Gold flowering 2	5.003
	CRR073317	Gold flowering 3	3.713
	CRR073318	Tawny withering 1	5.133
	CRR073319	Tawny withering 2	4.623
	CRR073320	Tawny withering 3	2.402