Detail information of GWHGAAZE019141


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008355894.11.9953E-57PREDICTED: galactinol synthase 2-like [Malus domestica]
Swissprottr|C7G304|GOLS2_SOLLC1E-53Galactinol synthase 2
trEMBLtr|A0A068JCE2|A0A068JCE2_TOBAC3E-55Galactinol synthase 2 {ECO:0000313|EMBL:AIE16185.1}
TAIR10AT2G47180.12E-43galactinol synthase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene3250011032502999-
GWHAAZE00000005mRNA3250011032502999-
GWHAAZE00000005exon3250261632502999-
GWHAAZE00000005exon3250011032500454-
GWHAAZE00000005CDS3250261632502999-
GWHAAZE00000005CDS3250011032500454-
Transcript Sequence

Network for GWHGAAZE019141

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01501.21Glyco_transf_81261801.70E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K18819GOLS Metabolic pathways map01100
Galactose metabolismmap00052

Gene Ontology

GO term OntologyName
GO:0016757molecular_functiontransferase activity, transferring glycosyl groups

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud1.728
SRR3591711White flower0.788
SRR3591712Green floral bud2.274
SRR3591713Yellow flower1.121
SRP173429 SRR8316895Juvenile bud stage 0.000
SRR8316896Juvenile bud stage 0.000
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.093
SRR8316900Third green stage 0.162
SRR8316901Third green stage 0.213
SRR8316898Complete white stage 0.156
SRR8316899Complete white stage 1.404
SRR8316903Complete white stage 0.172
SRR8316902Silver flowering stage0.092
SRR8316904Silver flowering stage0.352
SRR8316905Silver flowering stage0.047
SRR8316906Gold flowering stage 0.150
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.412
SRP132670SRR6706286Control0.334
SRR6706287Light intensity 50%0.294
SRR6706288Light intensity 20%0.282
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.260
CNS0095593Slightly white alabastrum(diploid) 20.000
CNS0095594Slightly white alabastrum(diploid) 30.000
CNS0095595Whole white alabastrum(diploid) 20.433
CNS0095596Whole white alabastrum(diploid) 30.413
CNS0095597Whole white alabastrum(diploid) 40.175
CNS0095598Silvery flower (diploied) 10.621
CNS0095599Silvery flower (diploied) 21.032
CNS0095600Silvery flower (diploied) 30.393
CNS0095601Golden flower (diploid) 10.327
CNS0095602Golden flower (diploid) 20.097
CNS0095603Golden flower (diploid) 30.151
CNS0095604Slightly white alabastrum(tetraploid) 10.066
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.059
CNS0095607Whole white alabastrum(tetraploid) 10.069
CNS0095608Whole white alabastrum(tetraploid) 20.070
CNS0095609Whole white alabastrum(tetraploid) 30.877
CNS0095610Silvery flower (tetraploid) 10.636
CNS0095611Silvery flower (tetraploid) 20.318
CNS0095612Silvery flower (tetraploid) 30.951
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.241
CNS0095615Golden flower (tetraploid) 30.147
CRA001975CRR073297Stem 10.261
CRR073298Stem 20.141
CRR073299Stem 30.020
CRR073300Leaf 10.258
CRR073301Leaf 20.324
CRR073302Leaf 30.357
CRR073303Juvenile bud 11.647
CRR073304Juvenile bud 21.104
CRR073305Juvenile bud 31.721
CRR073306Third green 10.233
CRR073307Third green 21.032
CRR073308Third green 30.997
CRR073309Second white 10.238
CRR073310Second white 20.341
CRR073311Second white 30.638
CRR073312Silver flowering 10.418
CRR073313Silver flowering 20.084
CRR073314Silver flowering 30.238
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.049
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.133
CRR073320Tawny withering 30.140