Gene detail

Detail information of GWHGAAZE019277

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_006580204.1	6.26402E-95	PREDICTED: disease resistance protein At4g27190-like isoform X1 [Glycine max]
Swissprot	tr\|O22727\|DRL16_ARATH	4E-39	Probable disease resistance protein At1g61190
trEMBL	tr\|K7KQM7\|K7KQM7_SOYBN	2E-95	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA05G29880.2}
TAIR10	AT1G61190.1	3E-29	LRR and NB-ARC domains-containing disease resistance protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	36094897	36098132	+
GWHAAZE00000005	mRNA	36094897	36098132	+
GWHAAZE00000005	exon	36094897	36096324	+
GWHAAZE00000005	exon	36096579	36098132	+
GWHAAZE00000005	CDS	36094897	36096324	+
GWHAAZE00000005	CDS	36096579	36098132	+

Transcript Sequence
>GWHTAAZE019299 ATGAGTGGGGTTGAGATTGCTGGAGCAGTAATTGCTGGGGGTGCGTTACTGCTGAACACCTACGAAAAATTGAAGGGCGAATCTGAATCTAAGAATGGTACGGAGATTCGTCCAACTTTGGCTGATGCTATACGAGAGCTGTGTGCATTACGGGACGATCGGGAGCACATATATCGTGCATACCGTCAAACAATGGAGCAAAGTAATAGATACCGTACCTGGCTCGAAGAGGTAAATAACTTAGAAGCGCGCGCGAATGGACTGATAAGGAAGCATGAGGAACGAAAGTGGCACAGGAGAATTAATCCTTTTTCAAGATTGGGTGAAAAGATGAAAAGTGCGACTATTGAGGCACTGCGTCTTTACAAGCAGGTCATAGATGTTCTGCTGATTAAAAGGGGTCCCCCGCCCGTTGTGGAGATGGACACACAAAGCATAAAAGAATATCCAACACTTCAAAATTGCCTGAATCTGATATTAGATCATCTACAAGACGATAGAGTTAAAGGTATTAGAGTGCATGGGATGTTTGGTGTAGGAAAAACAGTGATAATGCAGAACTTGAATAACCATGGAGATGTAGCTGGTACGTTTGATTTAGTCATTTGGGTGAAAGTCTCAGACAACAGTGATAACTTTAGCATCGGGAAAATGCAGAAAGATATTGCGAAAAGATTGAATCTCAATATGGAAGACGGAGGTGATCCTGCAGGTAGAATACGAAAAGAGCTAGAGGATAAGAAGTATTTGTTGCTGCTTGATGATGTTAATGAAGATCTAGATTTGGAAGAAATTGGAATCCGTCCGCCTAGTGATAATAGTGGTAGCAAGATAGTATTGACAAGTCGGAAGAGTCGCGTTTGTAACTCAATCGTGAACAGGAGTGTTGAAGTTAAAAGATTAAGCAATCAAGAAGCACAAGCAATGTTTCGAAAAGTTCTGGGCGACTCAAGAACTTGGCCAGTTGTGCAACAAGTTATTGAATATTGTTCCCGCCTTCCATTTCTGATACAAACAATAGGAAGCGCCTTTCAAAATAGAGAAACCGAGGACAGTTGGGCCAGAGGGTTGAATAACTTAAGACTTTTTCCGGATAAAGGAGATCCTGCCATTCAGAAAGCGTATAAATATGTAGAATTATGTTGTGAAGAGTTGATGGGCCGTAAGAAGGACTGCTTTTTATTCACTGCAATATTTCCAGAAGTGAGTGAGATAAATGCACGTTGTTTATTGGATTGTTGGGCAGCTGAAGAGTTGTATGGCACTGATCAAGAGCGTGCCTATGGGCGTCAGATATTGGATGAGCTCAAGACGGCATCATTACTTGAAGAAGGTACAAGTGGTCGTGGGGAGTATGTTAGCATGCACAAATTGATCCGCAAAGTCGCGCTTGATAAGTTGTTCGCTGATAGTGAACATCAACATTTGCTGAAAAATCTGAAAGTATTCTATGTCAATGATTGCACTAGTTTGGAGATACTTCCTCCCGAAATAGGAGAACTCGGCAGCCTCGAAATCCTTGATATACGGGGAACTAGAGTCCAGATACTAGATGAGTCTTTTCTCCATCGACAGATTAGTAGAGTTGTTGACATTTTTACTCCAAAAGTGATATTTGGAGGACCCAGTTCTGTTCCATTGGCGCCCTTCCCCGAGACCAATCGTCTGCGACATCTAAAGCGTTTGTTGGTATCATTTAGTGACAATGGTAGTCAAGATGCTGAAGGTTTTTGTGGGGCAATCTCCAATATTTCTACTACATTGGAAGAACTGGTCATTGATGTGAATTCAATCAAGAATTTGTGCAACACAACGATAAATATTGTGAGAGATGGTGTTGCTACCATGACAAGGCTCACATTTCTCAAGTTTATATTTAGAGATGGTGCTGAAGAAGTCATAAAAGTGGTGGCTGGGAATAAAAAAATCTACTTCCCCGAAGCAGTTAACCTTGGGGGTTTTCTCAACCATGGCTCCACTTCATTTGAGGTTTATGTTGGCTGCTCAATCTCAGCACATCAAATTCCTGAAATGAACCAATACCAAAGGCACTTGAAAGTTTGTAACACGCAAGGAAGTAACTTCCCTGCTCCGAATATTACAGCGCTGCTTCCTAGATGCAATGCATTTGAACTAGTTAATGACAACAGCCTTCAGCGTCTATCGCAGTTAGGAACTCCAAGCTTGGATGGGATCCAAGGATGTCTAATTGAAAGCTGCAGCACAATTGGAGCAATCGCAAATGGTGGTGACCCAGCCGTATTGGCAAGCCCAATGCTACCGGGCTTGCTAGAATTATACATGAAGAATTTGGCGCTGTTGACAAGCATATGGACTGGCCCTTGGAGGGCGGGCAGCCTGGTTAATCTGGAGACCCTTCTAATTGAGAATTGCATTGGAATTCAAGGGCTACTTACTGATTCTACAATTACATCAAATCTTCTACGTCTGAGGAAGCTAATACTGGCTAATTTGCAAAACTTATGCAGAATTTGTGCGAGTCAGGGTTCTAACTGGCCAGCCTTAGAAGAGCTCAGGATAGATGGTTGTCCTCTTTTAACTGAGTTACCCTTCCTACAAGTGAACGCGAACAACCTGAAGAAGCTAATACTTGTCAATCTGCCAACCTTAACAAATTTCGCAAATGTGGTGATATGGCCGGACTTGGAGGAGCTGCAAATGGTTGGTTGTCTTGATATTTCTATGTTGCCATTGAGCAATGGTAGCACAACGAGACTGAGGAAGTTAATACTTACCAATTTGCCAAATTTAAGGACCCTTAGCACAGATGCATCACTTGTTTCGCCCGCGTTAGAGGAGCTCGAGATAAGAGGTTGTCCAAGTCTGACCTGGTTTGCTTTCGACCAGATTAGTGCATCGAATCTGAGGTACATTAAAGCATCGCAGGGGTGGTGGGACGCACTGACATGGCAAGATCCCAACATTAAAGACATCGTTCAAAGGCTTTTCCGTCCGCTTTAA

Network for GWHGAAZE019277

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00931.23	NB-ARC	157	361	6.60E-37

Protein Sequence

>GWHPAAZE019288
MSGVEIAGAVIAGGALLLNTYEKLKGESESKNGTEIRPTLADAIRELCALRDDREHIYRAYRQTMEQSNRYRTWLEEVNNLEARANGLIRKHEERKWHRRINPFSRLGEKMKSATIEALRLYKQVIDVLLIKRGPPPVVEMDTQSIKEYPTLQNCLNLILDHLQDDRVKGIRVHGMFGVGKTVIMQNLNNHGDVAGTFDLVIWVKVSDNSDNFSIGKMQKDIAKRLNLNMEDGGDPAGRIRKELEDKKYLLLLDDVNEDLDLEEIGIRPPSDNSGSKIVLTSRKSRVCNSIVNRSVEVKRLSNQEAQAMFRKVLGDSRTWPVVQQVIEYCSRLPFLIQTIGSAFQNRETEDSWARGLNNLRLFPDKGDPAIQKAYKYVELCCEELMGRKKDCFLFTAIFPEVSEINARCLLDCWAAEELYGTDQERAYGRQILDELKTASLLEEGTSGRGEYVSMHKLIRKVALDKLFADSEHQHLLKNLKVFYVNDCTSLEILPPEIGELGSLEILDIRGTRVQILDESFLHRQISRVVDIFTPKVIFGGPSSVPLAPFPETNRLRHLKRLLVSFSDNGSQDAEGFCGAISNISTTLEELVIDVNSIKNLCNTTINIVRDGVATMTRLTFLKFIFRDGAEEVIKVVAGNKKIYFPEAVNLGGFLNHGSTSFEVYVGCSISAHQIPEMNQYQRHLKVCNTQGSNFPAPNITALLPRCNAFELVNDNSLQRLSQLGTPSLDGIQGCLIESCSTIGAIANGGDPAVLASPMLPGLLELYMKNLALLTSIWTGPWRAGSLVNLETLLIENCIGIQGLLTDSTITSNLLRLRKLILANLQNLCRICASQGSNWPALEELRIDGCPLLTELPFLQVNANNLKKLILVNLPTLTNFANVVIWPDLEELQMVGCLDISMLPLSNGSTTRLRKLILTNLPNLRTLSTDASLVSPALEELEIRGCPSLTWFAFDQISASNLRYIKASQGWWDALTWQDPNIKDIVQRLFRPL

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K13459	RPS2	Plant-pathogen interaction	map04626

Gene Ontology

GO term	Ontology	Name
GO:0043531	molecular_function	ADP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.297
	SRR3591706	second leaf	0.400
	SRR3591707	mature leaf	0.081
	SRR3591708	Shoot apex	0.812
	SRR3591709	Stem	0.323
	SRR3591710	White floral bud	0.177
	SRR3591711	White flower	0.100
	SRR3591712	Green floral bud	0.027
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.013
	SRR8316896	Juvenile bud stage	0.000
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.012
	SRR8316900	Third green stage	0.000
	SRR8316901	Third green stage	0.038
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.079
	SRR8316903	Complete white stage	0.017
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	0.017
	SRR6706287	Light intensity 50%	0.009
	SRR6706288	Light intensity 20%	0.036
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.000
	CNS0095593	Slightly white alabastrum(diploid) 2	0.003
	CNS0095594	Slightly white alabastrum(diploid) 3	0.000
	CNS0095595	Whole white alabastrum(diploid) 2	0.000
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.000
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.000
	CNS0095600	Silvery flower (diploied) 3	0.004
	CNS0095601	Golden flower (diploid) 1	0.015
	CNS0095602	Golden flower (diploid) 2	0.012
	CNS0095603	Golden flower (diploid) 3	0.008
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.000
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.014
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.018
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.034
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.029
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.000
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.009
	CRR073298	Stem 2	0.000
	CRR073299	Stem 3	0.001
	CRR073300	Leaf 1	0.000
	CRR073301	Leaf 2	0.000
	CRR073302	Leaf 3	0.001
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.025
	CRR073305	Juvenile bud 3	0.016
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.004
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.034
	CRR073319	Tawny withering 2	0.025
	CRR073320	Tawny withering 3	0.001