Detail information of GWHGAAZE019424


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrNP_001234222.13.56488E-78glutathione-S-transferase [Solanum lycopersicum]
Swissprottr|Q9ZW24|GSTU7_ARATH2E-57Glutathione S-transferase U7
trEMBLtr|A3FMP5|A3FMP5_SOLLC1E-78Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc01g099590.2.1}
TAIR10AT2G29420.12E-40glutathione S-transferase tau 7

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene4212307942124538-
GWHAAZE00000005mRNA4212307942124538-
GWHAAZE00000005exon4212418242124538-
GWHAAZE00000005exon4212324042123446-
GWHAAZE00000005exon4212307942123165-
GWHAAZE00000005five_prime_UTR4212450642124538-
GWHAAZE00000005CDS4212418242124505-
GWHAAZE00000005CDS4212324042123446-
GWHAAZE00000005CDS4212307942123165-
Transcript Sequence

Network for GWHGAAZE019424

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02798.21GST_N7781.70E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00799GST, gst Metabolic pathways map01100
Glutathione metabolismmap00480
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Drug metabolism - other enzymesmap00983
Longevity regulating pathway - wormmap04212

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.310
SRR3591706second leaf6.064
SRR3591707mature leaf15.962
SRR3591708Shoot apex6.313
SRR3591709Stem25.594
SRR3591710White floral bud14.342
SRR3591711White flower35.998
SRR3591712Green floral bud7.527
SRR3591713Yellow flower6.637
SRP173429 SRR8316895Juvenile bud stage 4.444
SRR8316896Juvenile bud stage 4.379
SRR8316897Juvenile bud stage 1.658
SRR8316894Third green stage 1.818
SRR8316900Third green stage 1.674
SRR8316901Third green stage 3.074
SRR8316898Complete white stage 2.237
SRR8316899Complete white stage 16.674
SRR8316903Complete white stage 7.691
SRR8316902Silver flowering stage2.448
SRR8316904Silver flowering stage0.980
SRR8316905Silver flowering stage1.202
SRR8316906Gold flowering stage 4.429
SRR8316907Gold flowering stage 4.578
SRR8316908Gold flowering stage 7.415
SRP132670SRR6706286Control9.255
SRR6706287Light intensity 50%6.839
SRR6706288Light intensity 20%6.326
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.122
CNS0095593Slightly white alabastrum(diploid) 29.879
CNS0095594Slightly white alabastrum(diploid) 35.508
CNS0095595Whole white alabastrum(diploid) 26.415
CNS0095596Whole white alabastrum(diploid) 31.471
CNS0095597Whole white alabastrum(diploid) 43.972
CNS0095598Silvery flower (diploied) 127.645
CNS0095599Silvery flower (diploied) 219.571
CNS0095600Silvery flower (diploied) 37.244
CNS0095601Golden flower (diploid) 136.819
CNS0095602Golden flower (diploid) 218.559
CNS0095603Golden flower (diploid) 320.355
CNS0095604Slightly white alabastrum(tetraploid) 11.630
CNS0095605Slightly white alabastrum(tetraploid) 20.987
CNS0095606Slightly white alabastrum(tetraploid) 33.531
CNS0095607Whole white alabastrum(tetraploid) 12.294
CNS0095608Whole white alabastrum(tetraploid) 20.454
CNS0095609Whole white alabastrum(tetraploid) 31.427
CNS0095610Silvery flower (tetraploid) 11.116
CNS0095611Silvery flower (tetraploid) 22.575
CNS0095612Silvery flower (tetraploid) 32.889
CNS0095613Golden flower (tetraploid) 10.419
CNS0095614Golden flower (tetraploid) 21.277
CNS0095615Golden flower (tetraploid) 31.548
CRA001975CRR073297Stem 15.582
CRR073298Stem 25.083
CRR073299Stem 34.424
CRR073300Leaf 13.194
CRR073301Leaf 23.288
CRR073302Leaf 34.663
CRR073303Juvenile bud 13.210
CRR073304Juvenile bud 21.760
CRR073305Juvenile bud 34.974
CRR073306Third green 10.652
CRR073307Third green 20.899
CRR073308Third green 31.400
CRR073309Second white 11.119
CRR073310Second white 21.507
CRR073311Second white 30.904
CRR073312Silver flowering 10.274
CRR073313Silver flowering 20.372
CRR073314Silver flowering 30.831
CRR073315Gold flowering 18.514
CRR073316Gold flowering 211.464
CRR073317Gold flowering 313.400
CRR073318Tawny withering 144.262
CRR073319Tawny withering 238.790
CRR073320Tawny withering 347.894