Detail information of GWHGAAZE019426


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP15490.15.63092E-21unnamed protein product [Coffea canephora]
Swissprottr|Q9MA60|FH11_ARATH3E-17Formin-like protein 11 (Precursor)
trEMBLtr|A0A068V3W4|A0A068V3W4_COFCA2E-21Formin-like protein {ECO:0000256|RuleBase:RU361260}
TAIR10AT3G05470.11E-15Actin-binding FH2 (formin homology 2) family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene4214663142147735+
GWHAAZE00000005mRNA4214663142147735+
GWHAAZE00000005exon4214663142146808+
GWHAAZE00000005exon4214746142147735+
GWHAAZE00000005CDS4214663142146808+
GWHAAZE00000005CDS4214746142147735+
Transcript Sequence

Network for GWHGAAZE019426

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0196


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.507
SRR3591706second leaf0.708
SRR3591707mature leaf0.000
SRR3591708Shoot apex1.263
SRR3591709Stem0.141
SRR3591710White floral bud2.160
SRR3591711White flower0.856
SRR3591712Green floral bud4.971
SRR3591713Yellow flower0.511
SRP173429 SRR8316895Juvenile bud stage 1.462
SRR8316896Juvenile bud stage 1.745
SRR8316897Juvenile bud stage 1.557
SRR8316894Third green stage 1.892
SRR8316900Third green stage 3.017
SRR8316901Third green stage 2.442
SRR8316898Complete white stage 0.120
SRR8316899Complete white stage 0.948
SRR8316903Complete white stage 0.106
SRR8316902Silver flowering stage0.052
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.032
SRR8316907Gold flowering stage 0.184
SRR8316908Gold flowering stage 0.666
SRP132670SRR6706286Control2.008
SRR6706287Light intensity 50%2.579
SRR6706288Light intensity 20%2.457
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.729
CNS0095593Slightly white alabastrum(diploid) 21.050
CNS0095594Slightly white alabastrum(diploid) 30.739
CNS0095595Whole white alabastrum(diploid) 20.714
CNS0095596Whole white alabastrum(diploid) 30.139
CNS0095597Whole white alabastrum(diploid) 40.585
CNS0095598Silvery flower (diploied) 10.133
CNS0095599Silvery flower (diploied) 20.306
CNS0095600Silvery flower (diploied) 30.373
CNS0095601Golden flower (diploid) 10.495
CNS0095602Golden flower (diploid) 20.604
CNS0095603Golden flower (diploid) 30.309
CNS0095604Slightly white alabastrum(tetraploid) 12.333
CNS0095605Slightly white alabastrum(tetraploid) 21.357
CNS0095606Slightly white alabastrum(tetraploid) 312.037
CNS0095607Whole white alabastrum(tetraploid) 11.234
CNS0095608Whole white alabastrum(tetraploid) 21.123
CNS0095609Whole white alabastrum(tetraploid) 32.836
CNS0095610Silvery flower (tetraploid) 10.265
CNS0095611Silvery flower (tetraploid) 20.713
CNS0095612Silvery flower (tetraploid) 30.418
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 15.581
CRR073298Stem 24.027
CRR073299Stem 33.001
CRR073300Leaf 14.987
CRR073301Leaf 25.840
CRR073302Leaf 33.246
CRR073303Juvenile bud 11.597
CRR073304Juvenile bud 21.463
CRR073305Juvenile bud 30.861
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.102
CRR073309Second white 10.304
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.474
CRR073317Gold flowering 30.072
CRR073318Tawny withering 11.474
CRR073319Tawny withering 20.497
CRR073320Tawny withering 30.000