Detail information of GWHGAAZE019448


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009338312.10PREDICTED: ATP synthase subunit gamma, mitochondrial-like [Pyrus x bretschneideri]
Swissprottr|P26360|ATPG3_IPOBA0ATP synthase subunit gamma, mitochondrial (Precursor)
trEMBLtr|M5WB68|M5WB68_PRUPE0ATP synthase subunit gamma {ECO:0000256|RuleBase:RU004001}
TAIR10AT2G33040.11E-140gamma subunit of Mt ATP synthase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene4354446943548661-
GWHAAZE00000005mRNA4354446943548661-
GWHAAZE00000005exon4354856443548661-
GWHAAZE00000005exon4354744743547520-
GWHAAZE00000005exon4354706343547302-
GWHAAZE00000005exon4354598843546134-
GWHAAZE00000005exon4354576343545890-
GWHAAZE00000005exon4354549443545616-
GWHAAZE00000005exon4354528243545401-
GWHAAZE00000005exon4354490143545022-
GWHAAZE00000005exon4354446943544538-
GWHAAZE00000005CDS4354856443548661-
GWHAAZE00000005CDS4354744743547520-
GWHAAZE00000005CDS4354706343547302-
GWHAAZE00000005CDS4354598843546134-
GWHAAZE00000005CDS4354576343545890-
GWHAAZE00000005CDS4354549443545616-
GWHAAZE00000005CDS4354528243545401-
GWHAAZE00000005CDS4354490143545022-
GWHAAZE00000005CDS4354446943544538-
Transcript Sequence

Network for GWHGAAZE019448

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00231.20ATP-synt563712.50E-74
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02136ATPeF1G, ATP5C1, ATP3 Metabolic pathways map01100
Oxidative phosphorylationmap00190
Thermogenesismap04714

Gene Ontology

GO term OntologyName
GO:0015986biological_processATP synthesis coupled proton transport
GO:0045261cellular_componentproton-transporting ATP synthase complex, catalytic core F(1)
GO:0046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf260.752
SRR3591706second leaf110.029
SRR3591707mature leaf67.426
SRR3591708Shoot apex158.752
SRR3591709Stem123.737
SRR3591710White floral bud231.708
SRR3591711White flower235.792
SRR3591712Green floral bud302.149
SRR3591713Yellow flower240.659
SRP173429 SRR8316895Juvenile bud stage 140.307
SRR8316896Juvenile bud stage 198.930
SRR8316897Juvenile bud stage 115.501
SRR8316894Third green stage 100.819
SRR8316900Third green stage 420.826
SRR8316901Third green stage 355.026
SRR8316898Complete white stage 179.366
SRR8316899Complete white stage 355.720
SRR8316903Complete white stage 216.801
SRR8316902Silver flowering stage192.528
SRR8316904Silver flowering stage237.240
SRR8316905Silver flowering stage125.172
SRR8316906Gold flowering stage 384.476
SRR8316907Gold flowering stage 383.257
SRR8316908Gold flowering stage 375.936
SRP132670SRR6706286Control291.443
SRR6706287Light intensity 50%288.799
SRR6706288Light intensity 20%338.612
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1162.169
CNS0095593Slightly white alabastrum(diploid) 2193.436
CNS0095594Slightly white alabastrum(diploid) 3147.836
CNS0095595Whole white alabastrum(diploid) 2171.455
CNS0095596Whole white alabastrum(diploid) 3200.023
CNS0095597Whole white alabastrum(diploid) 4173.557
CNS0095598Silvery flower (diploied) 1111.082
CNS0095599Silvery flower (diploied) 2140.373
CNS0095600Silvery flower (diploied) 3286.133
CNS0095601Golden flower (diploid) 1120.072
CNS0095602Golden flower (diploid) 2212.074
CNS0095603Golden flower (diploid) 3206.001
CNS0095604Slightly white alabastrum(tetraploid) 1209.721
CNS0095605Slightly white alabastrum(tetraploid) 2173.578
CNS0095606Slightly white alabastrum(tetraploid) 3271.514
CNS0095607Whole white alabastrum(tetraploid) 1166.736
CNS0095608Whole white alabastrum(tetraploid) 2178.144
CNS0095609Whole white alabastrum(tetraploid) 3313.363
CNS0095610Silvery flower (tetraploid) 1265.850
CNS0095611Silvery flower (tetraploid) 2332.829
CNS0095612Silvery flower (tetraploid) 3325.762
CNS0095613Golden flower (tetraploid) 1153.243
CNS0095614Golden flower (tetraploid) 2245.014
CNS0095615Golden flower (tetraploid) 3185.111
CRA001975CRR073297Stem 1190.241
CRR073298Stem 2187.492
CRR073299Stem 3229.026
CRR073300Leaf 1275.930
CRR073301Leaf 2285.955
CRR073302Leaf 3387.521
CRR073303Juvenile bud 1393.716
CRR073304Juvenile bud 2420.403
CRR073305Juvenile bud 3309.050
CRR073306Third green 1392.787
CRR073307Third green 2350.497
CRR073308Third green 3302.446
CRR073309Second white 1407.366
CRR073310Second white 2278.718
CRR073311Second white 3228.477
CRR073312Silver flowering 1201.395
CRR073313Silver flowering 2200.098
CRR073314Silver flowering 3187.368
CRR073315Gold flowering 1114.615
CRR073316Gold flowering 2117.731
CRR073317Gold flowering 3101.737
CRR073318Tawny withering 1157.970
CRR073319Tawny withering 2130.982
CRR073320Tawny withering 3143.520