Detail information of GWHGAAZE019512


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009767906.10PREDICTED: long chain acyl-CoA synthetase 6, peroxisomal isoform X1 [Nicotiana sylvestris]
Swissprottr|Q8LKS5|LACS7_ARATH0Long chain acyl-CoA synthetase 7, peroxisomal
trEMBLtr|K4B0U7|K4B0U7_SOLLC0Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc01g099100.2.1}
TAIR10AT5G27600.10long-chain acyl-CoA synthetase 7

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene4726337347286573-
GWHAAZE00000005mRNA4726337347286573-
GWHAAZE00000005exon4728645347286573-
GWHAAZE00000005exon4728379247283852-
GWHAAZE00000005exon4728361547283692-
GWHAAZE00000005exon4728340947283480-
GWHAAZE00000005exon4728323947283320-
GWHAAZE00000005exon4728214147282246-
GWHAAZE00000005exon4728197747282053-
GWHAAZE00000005exon4727956747279611-
GWHAAZE00000005exon4727938147279467-
GWHAAZE00000005exon4727836247278451-
GWHAAZE00000005exon4727818447278263-
GWHAAZE00000005exon4727798047278073-
GWHAAZE00000005exon4727689747276985-
GWHAAZE00000005exon4727671847276806-
GWHAAZE00000005exon4727488547275024-
GWHAAZE00000005exon4727268947272845-
GWHAAZE00000005exon4726877047268893-
GWHAAZE00000005exon4726825547268341-
GWHAAZE00000005exon4726768147267784-
GWHAAZE00000005exon4726751147267596-
GWHAAZE00000005exon4726610247266188-
GWHAAZE00000005exon4726592647266012-
GWHAAZE00000005exon4726337347263480-
GWHAAZE00000005CDS4728645347286573-
GWHAAZE00000005CDS4728379247283852-
GWHAAZE00000005CDS4728361547283692-
GWHAAZE00000005CDS4728340947283480-
GWHAAZE00000005CDS4728323947283320-
GWHAAZE00000005CDS4728214147282246-
GWHAAZE00000005CDS4728197747282053-
GWHAAZE00000005CDS4727956747279611-
GWHAAZE00000005CDS4727938147279467-
GWHAAZE00000005CDS4727836247278451-
GWHAAZE00000005CDS4727818447278263-
GWHAAZE00000005CDS4727798047278073-
GWHAAZE00000005CDS4727689747276985-
GWHAAZE00000005CDS4727671847276806-
GWHAAZE00000005CDS4727488547275024-
GWHAAZE00000005CDS4727268947272845-
GWHAAZE00000005CDS4726877047268893-
GWHAAZE00000005CDS4726825547268341-
GWHAAZE00000005CDS4726768147267784-
GWHAAZE00000005CDS4726751147267596-
GWHAAZE00000005CDS4726610247266188-
GWHAAZE00000005CDS4726592647266012-
GWHAAZE00000005CDS4726337347263480-
Transcript Sequence

Network for GWHGAAZE019512

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00501.29AMP-binding1095673.70E-97
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01897ACSL, fadD Metabolic pathways map01100
Fatty acid metabolismmap01212
Fatty acid biosynthesismap00061
Fatty acid degradationmap00071
Peroxisomemap04146
Ferroptosismap04216
Quorum sensingmap02024
Adipocytokine signaling pathwaymap04920
PPAR signaling pathwaymap03320
Thermogenesismap04714

Gene Ontology

GO term OntologyName
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf20.214
SRR3591706second leaf11.454
SRR3591707mature leaf11.327
SRR3591708Shoot apex13.525
SRR3591709Stem19.438
SRR3591710White floral bud13.401
SRR3591711White flower10.107
SRR3591712Green floral bud23.071
SRR3591713Yellow flower7.630
SRP173429 SRR8316895Juvenile bud stage 9.810
SRR8316896Juvenile bud stage 15.778
SRR8316897Juvenile bud stage 7.796
SRR8316894Third green stage 8.465
SRR8316900Third green stage 23.816
SRR8316901Third green stage 21.404
SRR8316898Complete white stage 6.049
SRR8316899Complete white stage 21.026
SRR8316903Complete white stage 8.578
SRR8316902Silver flowering stage3.822
SRR8316904Silver flowering stage4.136
SRR8316905Silver flowering stage1.628
SRR8316906Gold flowering stage 5.528
SRR8316907Gold flowering stage 5.222
SRR8316908Gold flowering stage 6.114
SRP132670SRR6706286Control16.253
SRR6706287Light intensity 50%16.057
SRR6706288Light intensity 20%18.127
CNP0000432CNS0095592Slightly white alabastrum(diploid) 112.823
CNS0095593Slightly white alabastrum(diploid) 215.104
CNS0095594Slightly white alabastrum(diploid) 312.306
CNS0095595Whole white alabastrum(diploid) 215.311
CNS0095596Whole white alabastrum(diploid) 313.741
CNS0095597Whole white alabastrum(diploid) 417.128
CNS0095598Silvery flower (diploied) 112.041
CNS0095599Silvery flower (diploied) 212.312
CNS0095600Silvery flower (diploied) 38.271
CNS0095601Golden flower (diploid) 111.483
CNS0095602Golden flower (diploid) 213.249
CNS0095603Golden flower (diploid) 311.239
CNS0095604Slightly white alabastrum(tetraploid) 113.642
CNS0095605Slightly white alabastrum(tetraploid) 212.036
CNS0095606Slightly white alabastrum(tetraploid) 315.197
CNS0095607Whole white alabastrum(tetraploid) 117.687
CNS0095608Whole white alabastrum(tetraploid) 218.221
CNS0095609Whole white alabastrum(tetraploid) 322.194
CNS0095610Silvery flower (tetraploid) 19.380
CNS0095611Silvery flower (tetraploid) 210.237
CNS0095612Silvery flower (tetraploid) 310.214
CNS0095613Golden flower (tetraploid) 16.536
CNS0095614Golden flower (tetraploid) 29.802
CNS0095615Golden flower (tetraploid) 36.421
CRA001975CRR073297Stem 116.229
CRR073298Stem 216.417
CRR073299Stem 313.356
CRR073300Leaf 119.664
CRR073301Leaf 219.105
CRR073302Leaf 315.766
CRR073303Juvenile bud 122.250
CRR073304Juvenile bud 211.880
CRR073305Juvenile bud 316.893
CRR073306Third green 15.437
CRR073307Third green 25.590
CRR073308Third green 36.008
CRR073309Second white 13.012
CRR073310Second white 24.856
CRR073311Second white 36.235
CRR073312Silver flowering 16.446
CRR073313Silver flowering 26.010
CRR073314Silver flowering 37.109
CRR073315Gold flowering 17.847
CRR073316Gold flowering 210.976
CRR073317Gold flowering 37.382
CRR073318Tawny withering 115.790
CRR073319Tawny withering 212.431
CRR073320Tawny withering 313.865