Detail information of GWHGAAZE019631


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAGZ15315.11.06597E-32mevalonate kinase [Platycodon grandiflorus]
Swissprottr|P46086|KIME_ARATH3E-21Mevalonate kinase
trEMBLtr|V9PEX2|V9PEX2_9ASTR4E-33Mevalonate kinase {ECO:0000313|EMBL:AGZ15315.1}
TAIR10AT5G27450.31E-18mevalonate kinase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene5580758055809679-
GWHAAZE00000005mRNA5580758055809679-
GWHAAZE00000005exon5580941855809679-
GWHAAZE00000005exon5580813155808374-
GWHAAZE00000005exon5580758055807631-
GWHAAZE00000005five_prime_UTR5580952155809679-
GWHAAZE00000005CDS5580941855809520-
GWHAAZE00000005CDS5580813155808374-
GWHAAZE00000005CDS5580758055807631-
Transcript Sequence

Network for GWHGAAZE019631

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00869E2.7.1.36, MVK, mvaK1 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Terpenoid backbone biosynthesismap00900
Peroxisomemap04146

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud1.980
SRR3591711White flower0.262
SRR3591712Green floral bud2.413
SRR3591713Yellow flower0.143
SRP173429 SRR8316895Juvenile bud stage 2.292
SRR8316896Juvenile bud stage 5.358
SRR8316897Juvenile bud stage 2.515
SRR8316894Third green stage 2.535
SRR8316900Third green stage 5.570
SRR8316901Third green stage 5.928
SRR8316898Complete white stage 0.927
SRR8316899Complete white stage 4.821
SRR8316903Complete white stage 0.697
SRR8316902Silver flowering stage0.237
SRR8316904Silver flowering stage0.243
SRR8316905Silver flowering stage0.115
SRR8316906Gold flowering stage 0.362
SRR8316907Gold flowering stage 0.091
SRR8316908Gold flowering stage 1.552
SRP132670SRR6706286Control2.764
SRR6706287Light intensity 50%1.843
SRR6706288Light intensity 20%2.958
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.444
CNS0095593Slightly white alabastrum(diploid) 26.492
CNS0095594Slightly white alabastrum(diploid) 39.200
CNS0095595Whole white alabastrum(diploid) 27.731
CNS0095596Whole white alabastrum(diploid) 38.319
CNS0095597Whole white alabastrum(diploid) 45.615
CNS0095598Silvery flower (diploied) 11.329
CNS0095599Silvery flower (diploied) 22.197
CNS0095600Silvery flower (diploied) 31.079
CNS0095601Golden flower (diploid) 12.191
CNS0095602Golden flower (diploid) 21.146
CNS0095603Golden flower (diploid) 31.229
CNS0095604Slightly white alabastrum(tetraploid) 16.535
CNS0095605Slightly white alabastrum(tetraploid) 27.338
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 14.734
CNS0095608Whole white alabastrum(tetraploid) 27.580
CNS0095609Whole white alabastrum(tetraploid) 33.994
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.081
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.094
CRA001975CRR073297Stem 14.218
CRR073298Stem 24.172
CRR073299Stem 36.405
CRR073300Leaf 13.007
CRR073301Leaf 23.327
CRR073302Leaf 32.387
CRR073303Juvenile bud 12.450
CRR073304Juvenile bud 21.539
CRR073305Juvenile bud 32.280
CRR073306Third green 10.000
CRR073307Third green 21.376
CRR073308Third green 30.187
CRR073309Second white 10.754
CRR073310Second white 20.189
CRR073311Second white 30.000
CRR073312Silver flowering 10.147
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 12.548
CRR073316Gold flowering 22.672
CRR073317Gold flowering 30.419
CRR073318Tawny withering 12.743
CRR073319Tawny withering 21.235
CRR073320Tawny withering 30.963