Detail information of GWHGAAZE019639


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCAN77023.19.8266E-152hypothetical protein VITISV_015334 [Vitis vinifera]
Swissprottr|Q9FR37|AMI1_ARATH2E-116Amidase 1
trEMBLtr|A5BL97|A5BL97_VITVI4E-152Putative uncharacterized protein {ECO:0000313|EMBL:CAN77023.1}
TAIR10AT1G08980.11E-88amidase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene5607462556078684-
GWHAAZE00000005mRNA5607462556078684-
GWHAAZE00000005exon5607462556074777-
GWHAAZE00000005exon5607653356076701-
GWHAAZE00000005exon5607687156077018-
GWHAAZE00000005exon5607755956077741-
GWHAAZE00000005exon5607834656078471-
GWHAAZE00000005exon5607856156078684-
GWHAAZE00000005CDS5607856156078684-
GWHAAZE00000005CDS5607834656078471-
GWHAAZE00000005CDS5607755956077741-
GWHAAZE00000005CDS5607687156077018-
GWHAAZE00000005CDS5607653356076701-
GWHAAZE00000005CDS5607462556074777-
Transcript Sequence

Network for GWHGAAZE019639

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01425.22Amidase2892.90E-36
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01426E3.5.1.4, amiE Metabolic pathways map01100
Microbial metabolism in diverse environmentsmap01120
Arginine and proline metabolismmap00330
Phenylalanine metabolismmap00360
Tryptophan metabolismmap00380
Aminobenzoate degradationmap00627
Styrene degradationmap00643

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.502
SRR3591706second leaf0.935
SRR3591707mature leaf0.616
SRR3591708Shoot apex1.396
SRR3591709Stem0.592
SRR3591710White floral bud9.284
SRR3591711White flower12.055
SRR3591712Green floral bud8.713
SRR3591713Yellow flower12.844
SRP173429 SRR8316895Juvenile bud stage 34.637
SRR8316896Juvenile bud stage 32.794
SRR8316897Juvenile bud stage 32.518
SRR8316894Third green stage 15.417
SRR8316900Third green stage 50.631
SRR8316901Third green stage 48.107
SRR8316898Complete white stage 24.510
SRR8316899Complete white stage 60.318
SRR8316903Complete white stage 32.172
SRR8316902Silver flowering stage18.390
SRR8316904Silver flowering stage22.374
SRR8316905Silver flowering stage11.510
SRR8316906Gold flowering stage 33.458
SRR8316907Gold flowering stage 37.681
SRR8316908Gold flowering stage 39.760
SRP132670SRR6706286Control32.328
SRR6706287Light intensity 50%31.933
SRR6706288Light intensity 20%32.684
CNP0000432CNS0095592Slightly white alabastrum(diploid) 129.136
CNS0095593Slightly white alabastrum(diploid) 230.438
CNS0095594Slightly white alabastrum(diploid) 325.981
CNS0095595Whole white alabastrum(diploid) 231.279
CNS0095596Whole white alabastrum(diploid) 323.182
CNS0095597Whole white alabastrum(diploid) 424.024
CNS0095598Silvery flower (diploied) 166.236
CNS0095599Silvery flower (diploied) 256.302
CNS0095600Silvery flower (diploied) 351.277
CNS0095601Golden flower (diploid) 156.394
CNS0095602Golden flower (diploid) 257.555
CNS0095603Golden flower (diploid) 354.356
CNS0095604Slightly white alabastrum(tetraploid) 128.314
CNS0095605Slightly white alabastrum(tetraploid) 225.154
CNS0095606Slightly white alabastrum(tetraploid) 348.119
CNS0095607Whole white alabastrum(tetraploid) 118.543
CNS0095608Whole white alabastrum(tetraploid) 214.287
CNS0095609Whole white alabastrum(tetraploid) 332.658
CNS0095610Silvery flower (tetraploid) 157.886
CNS0095611Silvery flower (tetraploid) 260.979
CNS0095612Silvery flower (tetraploid) 357.232
CNS0095613Golden flower (tetraploid) 153.554
CNS0095614Golden flower (tetraploid) 255.229
CNS0095615Golden flower (tetraploid) 371.120
CRA001975CRR073297Stem 154.978
CRR073298Stem 248.899
CRR073299Stem 352.108
CRR073300Leaf 140.535
CRR073301Leaf 241.395
CRR073302Leaf 336.374
CRR073303Juvenile bud 139.183
CRR073304Juvenile bud 240.881
CRR073305Juvenile bud 345.771
CRR073306Third green 127.234
CRR073307Third green 224.272
CRR073308Third green 325.324
CRR073309Second white 129.218
CRR073310Second white 232.663
CRR073311Second white 322.628
CRR073312Silver flowering 120.299
CRR073313Silver flowering 220.708
CRR073314Silver flowering 326.062
CRR073315Gold flowering 1122.366
CRR073316Gold flowering 2180.256
CRR073317Gold flowering 3121.927
CRR073318Tawny withering 155.601
CRR073319Tawny withering 257.993
CRR073320Tawny withering 352.430