Detail information of GWHGAAZE019729


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006382191.12.45362E-20hypothetical protein POPTR_0006s29210g [Populus trichocarpa]
Swissprottr|Q1PEY5|HIBC2_ARATH5E-14Probable 3-hydroxyisobutyryl-CoA hydrolase 2
trEMBLtr|U5G8W9|U5G8W9_POPTR9E-21Uncharacterized protein {ECO:0000313|EMBL:ERP59988.1}
TAIR10AT2G30650.14E-12ATP-dependent caseinolytic (Clp) protease/crotonase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene5975350559756962-
GWHAAZE00000005mRNA5975350559756962-
GWHAAZE00000005exon5975350559753565-
GWHAAZE00000005exon5975384359753973-
GWHAAZE00000005exon5975454059754625-
GWHAAZE00000005exon5975641659756503-
GWHAAZE00000005exon5975687059756962-
GWHAAZE00000005five_prime_UTR5975687059756962-
GWHAAZE00000005five_prime_UTR5975641659756503-
GWHAAZE00000005five_prime_UTR5975458259754625-
GWHAAZE00000005CDS5975454059754581-
GWHAAZE00000005CDS5975384359753973-
GWHAAZE00000005CDS5975350559753565-
Transcript Sequence

Network for GWHGAAZE019729

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16113.6ECH_21785.90E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05605HIBCH Metabolic pathways map01100
Carbon metabolismmap01200
Propanoate metabolismmap00640
Valine, leucine and isoleucine degradationmap00280
beta-Alanine metabolismmap00410

Gene Ontology

GO term OntologyName
GO:0003860molecular_function3-hydroxyisobutyryl-CoA hydrolase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud2.002
SRR3591711White flower21.566
SRR3591712Green floral bud0.029
SRR3591713Yellow flower20.326
SRP173429 SRR8316895Juvenile bud stage 0.118
SRR8316896Juvenile bud stage 0.012
SRR8316897Juvenile bud stage 0.022
SRR8316894Third green stage 0.018
SRR8316900Third green stage 0.124
SRR8316901Third green stage 0.062
SRR8316898Complete white stage 1.779
SRR8316899Complete white stage 0.172
SRR8316903Complete white stage 1.054
SRR8316902Silver flowering stage258.668
SRR8316904Silver flowering stage344.452
SRR8316905Silver flowering stage170.917
SRR8316906Gold flowering stage 694.058
SRR8316907Gold flowering stage 590.465
SRR8316908Gold flowering stage 606.557
SRP132670SRR6706286Control0.000
SRR6706287Light intensity 50%0.000
SRR6706288Light intensity 20%0.000
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.252
CNS0095593Slightly white alabastrum(diploid) 20.167
CNS0095594Slightly white alabastrum(diploid) 30.308
CNS0095595Whole white alabastrum(diploid) 20.534
CNS0095596Whole white alabastrum(diploid) 30.229
CNS0095597Whole white alabastrum(diploid) 40.195
CNS0095598Silvery flower (diploied) 128.622
CNS0095599Silvery flower (diploied) 223.791
CNS0095600Silvery flower (diploied) 3128.791
CNS0095601Golden flower (diploid) 128.170
CNS0095602Golden flower (diploid) 272.437
CNS0095603Golden flower (diploid) 373.826
CNS0095604Slightly white alabastrum(tetraploid) 10.423
CNS0095605Slightly white alabastrum(tetraploid) 20.023
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 11.084
CNS0095608Whole white alabastrum(tetraploid) 20.500
CNS0095609Whole white alabastrum(tetraploid) 30.324
CNS0095610Silvery flower (tetraploid) 1232.644
CNS0095611Silvery flower (tetraploid) 2224.592
CNS0095612Silvery flower (tetraploid) 31006.230
CNS0095613Golden flower (tetraploid) 1314.924
CNS0095614Golden flower (tetraploid) 2225.285
CNS0095615Golden flower (tetraploid) 3267.274
CRA001975CRR073297Stem 10.410
CRR073298Stem 20.195
CRR073299Stem 30.406
CRR073300Leaf 11.031
CRR073301Leaf 20.331
CRR073302Leaf 30.900
CRR073303Juvenile bud 10.052
CRR073304Juvenile bud 20.070
CRR073305Juvenile bud 30.248
CRR073306Third green 1256.858
CRR073307Third green 2154.237
CRR073308Third green 3157.647
CRR073309Second white 1315.179
CRR073310Second white 2559.326
CRR073311Second white 3481.296
CRR073312Silver flowering 1301.398
CRR073313Silver flowering 2192.131
CRR073314Silver flowering 3263.967
CRR073315Gold flowering 10.078
CRR073316Gold flowering 20.096
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.340
CRR073319Tawny withering 20.234
CRR073320Tawny withering 30.308