Detail information of GWHGAAZE019944


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006366529.15.91311E-52PREDICTED: F-box protein At5g07610-like [Solanum tuberosum]
Swissprottr|Q9FLS0|FB253_ARATH6E-35F-box protein At5g07610
trEMBLtr|M1BZ34|M1BZ34_SOLTU2E-52Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400056172}
TAIR10AT5G07610.11E-31F-box family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene6976904469770174-
GWHAAZE00000005mRNA6976904469770174-
GWHAAZE00000005exon6976904469770174-
GWHAAZE00000005CDS6976904469770174-
Transcript Sequence

Network for GWHGAAZE019944

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud0.384
SRR3591711White flower0.000
SRR3591712Green floral bud1.001
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.269
SRR8316896Juvenile bud stage 0.964
SRR8316897Juvenile bud stage 0.346
SRR8316894Third green stage 0.373
SRR8316900Third green stage 1.082
SRR8316901Third green stage 0.986
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.143
SRR6706287Light intensity 50%0.112
SRR6706288Light intensity 20%0.306
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.045
CNS0095593Slightly white alabastrum(diploid) 20.773
CNS0095594Slightly white alabastrum(diploid) 31.017
CNS0095595Whole white alabastrum(diploid) 21.934
CNS0095596Whole white alabastrum(diploid) 31.339
CNS0095597Whole white alabastrum(diploid) 42.700
CNS0095598Silvery flower (diploied) 10.169
CNS0095599Silvery flower (diploied) 20.114
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.036
CNS0095603Golden flower (diploid) 30.034
CNS0095604Slightly white alabastrum(tetraploid) 10.573
CNS0095605Slightly white alabastrum(tetraploid) 20.657
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 11.588
CNS0095608Whole white alabastrum(tetraploid) 22.038
CNS0095609Whole white alabastrum(tetraploid) 30.510
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.069
CNS0095612Silvery flower (tetraploid) 30.061
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.022
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.205
CRR073298Stem 20.251
CRR073299Stem 30.046
CRR073300Leaf 10.533
CRR073301Leaf 20.076
CRR073302Leaf 30.404
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.089
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.049
CRR073319Tawny withering 20.094
CRR073320Tawny withering 30.254