Detail information of GWHGAAZE020258


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006374419.15.9127E-105hypothetical protein POPTR_0015s07020g [Populus trichocarpa]
trEMBLtr|M5XHH6|M5XHH6_PRUPE4E-108Uncharacterized protein {ECO:0000313|EMBL:EMJ18505.1}
TAIR10AT5G45480.15E-23Protein of unknown function (DUF594)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene8224974982251869-
GWHAAZE00000005mRNA8224974982251869-
GWHAAZE00000005exon8224974982251869-
GWHAAZE00000005CDS8224974982251869-
Transcript Sequence

Network for GWHGAAZE020258

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0231


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13968.7DUF4220513713.30E-63
PF04578.14DUF5946036521.30E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.047
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex1.319
SRR3591709Stem0.000
SRR3591710White floral bud2.539
SRR3591711White flower2.286
SRR3591712Green floral bud1.476
SRR3591713Yellow flower0.135
SRP173429 SRR8316895Juvenile bud stage 1.871
SRR8316896Juvenile bud stage 1.555
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.545
SRR8316900Third green stage 0.040
SRR8316901Third green stage 0.107
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 1.466
SRR8316903Complete white stage 0.409
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.655
SRR6706287Light intensity 50%0.801
SRR6706288Light intensity 20%0.643
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.640
CNS0095593Slightly white alabastrum(diploid) 22.577
CNS0095594Slightly white alabastrum(diploid) 34.705
CNS0095595Whole white alabastrum(diploid) 23.572
CNS0095596Whole white alabastrum(diploid) 30.023
CNS0095597Whole white alabastrum(diploid) 43.134
CNS0095598Silvery flower (diploied) 114.089
CNS0095599Silvery flower (diploied) 25.568
CNS0095600Silvery flower (diploied) 31.746
CNS0095601Golden flower (diploid) 115.679
CNS0095602Golden flower (diploid) 25.863
CNS0095603Golden flower (diploid) 35.644
CNS0095604Slightly white alabastrum(tetraploid) 11.108
CNS0095605Slightly white alabastrum(tetraploid) 20.401
CNS0095606Slightly white alabastrum(tetraploid) 33.626
CNS0095607Whole white alabastrum(tetraploid) 10.820
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.271
CNS0095610Silvery flower (tetraploid) 10.057
CNS0095611Silvery flower (tetraploid) 21.162
CNS0095612Silvery flower (tetraploid) 31.308
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.017
CRA001975CRR073297Stem 14.083
CRR073298Stem 23.951
CRR073299Stem 35.850
CRR073300Leaf 10.415
CRR073301Leaf 20.408
CRR073302Leaf 30.785
CRR073303Juvenile bud 10.034
CRR073304Juvenile bud 20.247
CRR073305Juvenile bud 30.059
CRR073306Third green 10.003
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000