Detail information of GWHGAAZE020290


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP43309.13.20431E-07hypothetical protein JCGZ_24230 [Jatropha curcas]
trEMBLtr|A0A067LGM1|A0A067LGM1_JATCU0.0000001Uncharacterized protein {ECO:0000313|EMBL:KDP43309.1}

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene8315995083162605-
GWHAAZE00000005mRNA8315995083162605-
GWHAAZE00000005exon8316260383162605-
GWHAAZE00000005exon8316073483160874-
GWHAAZE00000005exon8316030083160421-
GWHAAZE00000005exon8315995083160202-
GWHAAZE00000005CDS8316260383162605-
GWHAAZE00000005CDS8316073483160874-
GWHAAZE00000005CDS8316030083160421-
GWHAAZE00000005CDS8315995083160202-
Transcript Sequence

Network for GWHGAAZE020290

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0110
CFinderModule0275


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00076.23RRM_1611035.30E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676molecular_functionnucleic acid binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud0.000
SRR3591711White flower0.000
SRR3591712Green floral bud0.000
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 1.504
SRR8316896Juvenile bud stage 2.332
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.988
SRR8316900Third green stage 2.241
SRR8316901Third green stage 1.942
SRR8316898Complete white stage 0.050
SRR8316899Complete white stage 1.331
SRR8316903Complete white stage 0.204
SRR8316902Silver flowering stage0.098
SRR8316904Silver flowering stage0.143
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.632
SRR8316907Gold flowering stage 0.016
SRR8316908Gold flowering stage 0.343
SRP132670SRR6706286Control1.590
SRR6706287Light intensity 50%2.527
SRR6706288Light intensity 20%2.330
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.650
CNS0095593Slightly white alabastrum(diploid) 22.212
CNS0095594Slightly white alabastrum(diploid) 31.285
CNS0095595Whole white alabastrum(diploid) 21.324
CNS0095596Whole white alabastrum(diploid) 31.242
CNS0095597Whole white alabastrum(diploid) 40.745
CNS0095598Silvery flower (diploied) 11.657
CNS0095599Silvery flower (diploied) 21.146
CNS0095600Silvery flower (diploied) 30.625
CNS0095601Golden flower (diploid) 10.560
CNS0095602Golden flower (diploid) 20.412
CNS0095603Golden flower (diploid) 31.215
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.007
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 12.820
CRR073298Stem 22.045
CRR073299Stem 30.585
CRR073300Leaf 12.239
CRR073301Leaf 22.515
CRR073302Leaf 30.444
CRR073303Juvenile bud 10.580
CRR073304Juvenile bud 20.300
CRR073305Juvenile bud 30.497
CRR073306Third green 10.000
CRR073307Third green 20.074
CRR073308Third green 30.065
CRR073309Second white 10.033
CRR073310Second white 20.000
CRR073311Second white 30.793
CRR073312Silver flowering 10.089
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.293
CRR073315Gold flowering 10.559
CRR073316Gold flowering 21.548
CRR073317Gold flowering 30.469
CRR073318Tawny withering 10.850
CRR073319Tawny withering 20.084
CRR073320Tawny withering 30.814