Detail information of GWHGAAZE020358


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009605657.12.01661E-61PREDICTED: protein FAR1-RELATED SEQUENCE 5 isoform X2 [Nicotiana tomentosiformis]
trEMBLtr|K4C939|K4C939_SOLLC6E-61Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc06g073200.2.1}
TAIR10AT3G59470.24E-39Far-red impaired responsive (FAR1) family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene18544151855665-
GWHAAZE00000006mRNA18544151855665-
GWHAAZE00000006exon18555461855665-
GWHAAZE00000006exon18544151854609-
GWHAAZE00000006CDS18555461855665-
GWHAAZE00000006CDS18544151854609-
Transcript Sequence

Network for GWHGAAZE020358

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0007


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.268
SRR3591706second leaf1.030
SRR3591707mature leaf0.417
SRR3591708Shoot apex3.134
SRR3591709Stem5.517
SRR3591710White floral bud5.578
SRR3591711White flower10.983
SRR3591712Green floral bud9.241
SRR3591713Yellow flower5.727
SRP173429 SRR8316895Juvenile bud stage 3.313
SRR8316896Juvenile bud stage 4.363
SRR8316897Juvenile bud stage 0.266
SRR8316894Third green stage 1.030
SRR8316900Third green stage 3.758
SRR8316901Third green stage 3.651
SRR8316898Complete white stage 2.268
SRR8316899Complete white stage 7.920
SRR8316903Complete white stage 3.979
SRR8316902Silver flowering stage2.289
SRR8316904Silver flowering stage4.421
SRR8316905Silver flowering stage1.236
SRR8316906Gold flowering stage 5.818
SRR8316907Gold flowering stage 5.132
SRR8316908Gold flowering stage 2.958
SRP132670SRR6706286Control0.665
SRR6706287Light intensity 50%1.760
SRR6706288Light intensity 20%1.323
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.797
CNS0095593Slightly white alabastrum(diploid) 28.368
CNS0095594Slightly white alabastrum(diploid) 36.337
CNS0095595Whole white alabastrum(diploid) 29.613
CNS0095596Whole white alabastrum(diploid) 36.865
CNS0095597Whole white alabastrum(diploid) 44.647
CNS0095598Silvery flower (diploied) 17.958
CNS0095599Silvery flower (diploied) 26.802
CNS0095600Silvery flower (diploied) 36.509
CNS0095601Golden flower (diploid) 14.062
CNS0095602Golden flower (diploid) 26.022
CNS0095603Golden flower (diploid) 35.710
CNS0095604Slightly white alabastrum(tetraploid) 112.193
CNS0095605Slightly white alabastrum(tetraploid) 212.739
CNS0095606Slightly white alabastrum(tetraploid) 312.158
CNS0095607Whole white alabastrum(tetraploid) 111.666
CNS0095608Whole white alabastrum(tetraploid) 212.246
CNS0095609Whole white alabastrum(tetraploid) 37.516
CNS0095610Silvery flower (tetraploid) 114.280
CNS0095611Silvery flower (tetraploid) 212.830
CNS0095612Silvery flower (tetraploid) 311.622
CNS0095613Golden flower (tetraploid) 112.000
CNS0095614Golden flower (tetraploid) 217.985
CNS0095615Golden flower (tetraploid) 313.163
CRA001975CRR073297Stem 10.924
CRR073298Stem 21.973
CRR073299Stem 32.674
CRR073300Leaf 11.871
CRR073301Leaf 21.483
CRR073302Leaf 32.399
CRR073303Juvenile bud 12.890
CRR073304Juvenile bud 21.028
CRR073305Juvenile bud 32.560
CRR073306Third green 11.040
CRR073307Third green 20.641
CRR073308Third green 31.109
CRR073309Second white 10.289
CRR073310Second white 22.631
CRR073311Second white 31.995
CRR073312Silver flowering 13.905
CRR073313Silver flowering 22.176
CRR073314Silver flowering 31.565
CRR073315Gold flowering 11.601
CRR073316Gold flowering 21.082
CRR073317Gold flowering 30.668
CRR073318Tawny withering 10.721
CRR073319Tawny withering 24.123
CRR073320Tawny withering 31.971