Detail information of GWHGAAZE020362


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002273667.10PREDICTED: exocyst complex component EXO84B [Vitis vinifera]
Swissprottr|Q9LTB0|EX84B_ARATH0Exocyst complex component EXO84B
trEMBLtr|F6HBU4|F6HBU4_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB49732.1}
TAIR10AT5G49830.10exocyst complex component 84B

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene20833472088749-
GWHAAZE00000006mRNA20833472088749-
GWHAAZE00000006exon20833472083437-
GWHAAZE00000006exon20844482084584-
GWHAAZE00000006exon20846852084937-
GWHAAZE00000006exon20863612086432-
GWHAAZE00000006exon20865062086738-
GWHAAZE00000006exon20874322087706-
GWHAAZE00000006exon20878112088092-
GWHAAZE00000006exon20881632088443-
GWHAAZE00000006exon20887092088749-
GWHAAZE00000006CDS20887092088749-
GWHAAZE00000006CDS20881632088443-
GWHAAZE00000006CDS20878112088092-
GWHAAZE00000006CDS20874322087706-
GWHAAZE00000006CDS20865062086738-
GWHAAZE00000006CDS20863612086432-
GWHAAZE00000006CDS20846852084937-
GWHAAZE00000006CDS20844482084584-
GWHAAZE00000006CDS20833472083437-
Transcript Sequence

Network for GWHGAAZE020362

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0118


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08700.12Vps511402.90E-05
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.086
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud0.115
SRR3591711White flower0.132
SRR3591712Green floral bud0.023
SRR3591713Yellow flower0.123
SRP173429 SRR8316895Juvenile bud stage 0.021
SRR8316896Juvenile bud stage 0.058
SRR8316897Juvenile bud stage 0.030
SRR8316894Third green stage 0.000
SRR8316900Third green stage 0.000
SRR8316901Third green stage 0.067
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.027
SRR8316902Silver flowering stage0.044
SRR8316904Silver flowering stage0.041
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.051
SRR8316907Gold flowering stage 0.095
SRR8316908Gold flowering stage 0.087
SRP132670SRR6706286Control0.000
SRR6706287Light intensity 50%0.012
SRR6706288Light intensity 20%0.029
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.027
CNS0095593Slightly white alabastrum(diploid) 20.050
CNS0095594Slightly white alabastrum(diploid) 30.101
CNS0095595Whole white alabastrum(diploid) 20.000
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.013
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.032
CNS0095603Golden flower (diploid) 30.027
CNS0095604Slightly white alabastrum(tetraploid) 10.010
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.030
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.047
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.011
CNS0095612Silvery flower (tetraploid) 30.010
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.042
CNS0095615Golden flower (tetraploid) 30.036
CRA001975CRR073297Stem 10.028
CRR073298Stem 20.026
CRR073299Stem 30.040
CRR073300Leaf 10.000
CRR073301Leaf 20.064
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.042
CRR073305Juvenile bud 30.048
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.024
CRR073309Second white 10.000
CRR073310Second white 20.104
CRR073311Second white 30.086
CRR073312Silver flowering 10.267
CRR073313Silver flowering 20.668
CRR073314Silver flowering 30.152
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.036
CRR073319Tawny withering 20.079
CRR073320Tawny withering 30.095