Gene detail

Detail information of GWHGAAZE020393

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_004237929.1	0	PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Solanum lycopersicum]
COG	YP_004958904.1	0.0000009	MGT family glycosyltransferase
Swissprot	tr\|Q9LME8\|U85A7_ARATH	6E-156	UDP-glycosyltransferase 85A7
trEMBL	tr\|K4BTX7\|K4BTX7_SOLLC	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Solyc04g074390.2.1}
TAIR10	AT1G22340.1	1E-127	UDP-glucosyl transferase 85A7

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	3309398	3312411	+
GWHAAZE00000006	mRNA	3309398	3312411	+
GWHAAZE00000006	exon	3309398	3309728	+
GWHAAZE00000006	exon	3311478	3311546	+
GWHAAZE00000006	exon	3311627	3312411	+
GWHAAZE00000006	CDS	3309398	3309728	+
GWHAAZE00000006	CDS	3311478	3311546	+
GWHAAZE00000006	CDS	3311627	3312411	+

Transcript Sequence
>GWHTAAZE020415 ATGGGTTCGATGGGGTTCTCGCAAAAGCCACATGCTGTATGCATACCATCCCCAGCTCAAGGTCACATAAACCCAATGCTTAAATTAGCAAAACTCCTCTATCACAAAGGCTTTCACATCACCTTTGTCAACACCGAGTTCAACCATCGCGCCTCCTCGATCTCGAGGCCCCACTCCCTTGGCGGCCTCCCGTCGTTCAGATTTGAAACTATTCCTGATGGGTTGCCACCCTCGAATGTTGGCTACACAAGATATACCCTCTTTGTGTCGTCCACTACTCTGAAGTGTTTGGCTCCATTTAAAGAGCTCCTCAAGAAACTCAACCATACCAATGCAAGCTACGTATCAAATGGGTATTTGGATACACAGTTAGATTGGATTCCTGCTATGAAAGGCATACAGACTAAAAGAGCCTCTGCCATTATTTTGAACACATTCGACGATTTGGAACACGATGTTTTAGACACGCTTTCCTCCGTTTTACCACCAATTTACAGCATTGGTCCATTACAATTTCTCCATGACCAACTCAACGACAAGGATATAAAATTAATAGGATCGAATTTATGGAAGGAAGAGACAGAGTGCCTAGAATGGCTCGACACCAAAGAACCAAACTCAGTCGTCTACGTGAATTTTGGTAGCATTACCGTGTTGACACCAGACCAACTCGTCGAGTTCTCATGGGGACTAGCTAATAGCAAACAAACTTTTGTGTGGATAATAAGGCCAGATTTAGTCTCTGGTGACTCGGCTGTACTTCCAGCCGAGTTTTTGGAAGAGACTAAAGAAAGAGGGCTACTGGCAAGCTGGTGCCCACAAGAGCAAGTACTGAGTCACCCATCTATAGGTGGGTTTTTGACTCACAGTGGGTGGAATTCAACTCTGGAAAGTATATCGGGCGGCGTGCCGATGGTTTGCTGGCCCTTTTTTGCTGAGCAACAGACGAATTGTTGGTCTTGTAGCACTCAATGGGGCATTGGGATGGAGATCGATAATAACGTTAAAAGAGATGAAGTAGATAGTCTAGTGAGTATGTTGATGGTTGGCGAGAAGGGGAAAGAGATGAAAAGAAAGGCCATGGATTGGAAGAGAAAGGCTGAAGATGCTACTAATTCAGGTGGGTCATCTTACCTGAATTTGGAGAAGATGATTAGTCAAGTGCTGCTTTCTCCAAAACATTAA

Network for GWHGAAZE020393

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0119

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00201.19	UDPGT	199	351	8.30E-27

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016758	molecular_function	transferase activity, transferring hexosyl groups

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.028
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.305
	SRR3591710	White floral bud	6.798
	SRR3591711	White flower	4.724
	SRR3591712	Green floral bud	0.143
	SRR3591713	Yellow flower	6.796
SRP173429	SRR8316895	Juvenile bud stage	0.000
	SRR8316896	Juvenile bud stage	0.067
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.037
	SRR8316900	Third green stage	0.012
	SRR8316901	Third green stage	0.021
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.000
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.041
	SRR8316904	Silver flowering stage	0.052
	SRR8316905	Silver flowering stage	0.019
	SRR8316906	Gold flowering stage	1.719
	SRR8316907	Gold flowering stage	0.413
	SRR8316908	Gold flowering stage	3.970
SRP132670	SRR6706286	Control	0.000
	SRR6706287	Light intensity 50%	0.025
	SRR6706288	Light intensity 20%	0.021
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.037
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	0.115
	CNS0095595	Whole white alabastrum(diploid) 2	0.000
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.000
	CNS0095598	Silvery flower (diploied) 1	0.070
	CNS0095599	Silvery flower (diploied) 2	0.137
	CNS0095600	Silvery flower (diploied) 3	0.046
	CNS0095601	Golden flower (diploid) 1	0.055
	CNS0095602	Golden flower (diploid) 2	0.169
	CNS0095603	Golden flower (diploid) 3	0.096
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.119
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.126
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.000
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.019
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.000
	CNS0095610	Silvery flower (tetraploid) 1	0.071
	CNS0095611	Silvery flower (tetraploid) 2	0.021
	CNS0095612	Silvery flower (tetraploid) 3	0.247
	CNS0095613	Golden flower (tetraploid) 1	1.079
	CNS0095614	Golden flower (tetraploid) 2	0.487
	CNS0095615	Golden flower (tetraploid) 3	0.150
CRA001975	CRR073297	Stem 1	0.021
	CRR073298	Stem 2	0.011
	CRR073299	Stem 3	0.012
	CRR073300	Leaf 1	0.020
	CRR073301	Leaf 2	0.000
	CRR073302	Leaf 3	0.023
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.030
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.196
	CRR073307	Third green 2	0.427
	CRR073308	Third green 3	0.155
	CRR073309	Second white 1	2.395
	CRR073310	Second white 2	3.422
	CRR073311	Second white 3	4.145
	CRR073312	Silver flowering 1	4.859
	CRR073313	Silver flowering 2	5.246
	CRR073314	Silver flowering 3	5.168
	CRR073315	Gold flowering 1	0.025
	CRR073316	Gold flowering 2	0.045
	CRR073317	Gold flowering 3	0.110
	CRR073318	Tawny withering 1	2.874
	CRR073319	Tawny withering 2	4.669
	CRR073320	Tawny withering 3	0.621