Gene detail

Detail information of GWHGAAZE020415

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	F8WKW1.1UGT2_GARJA	0	RecName: Full=7-deoxyloganetin glucosyltransferase; AltName: Full=Genipin glucosyltransferase; AltName: Full=UDP-glucose glucosyltransferase 2; Short=GjUGT2; AltName: Full=UDP-glycosyltransferase 85A24 [Gardenia jasminoides]
COG	YP_004958904.1	0.000004	MGT family glycosyltransferase
Swissprot	tr\|F8WKW1\|UGT2_GARJA	0	7-deoxyloganetin glucosyltransferase
trEMBL	tr\|A0A068TXT7\|A0A068TXT7_COFCA	0	Coffea canephora DH200=94 genomic scaffold, scaffold_6 {ECO:0000313\|EMBL:CDP01076.1}
TAIR10	AT1G22360.1	2E-176	UDP-glucosyl transferase 85A2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	4374621	4377637	+
GWHAAZE00000006	mRNA	4374621	4377637	+
GWHAAZE00000006	exon	4374621	4374859	+
GWHAAZE00000006	exon	4374955	4375133	+
GWHAAZE00000006	exon	4376703	4377637	+
GWHAAZE00000006	CDS	4374621	4374859	+
GWHAAZE00000006	CDS	4374955	4375133	+
GWHAAZE00000006	CDS	4376703	4377637	+

Transcript Sequence
>GWHTAAZE020437 ATGGGTTCGATGGGGTTCTCGCAAAAGCCACATGCTGTATGCATACCATCCCCAGCTCAAGGTCACATAAACCCAATGCTTAAATTAGCAAAACTCCTCTATCACAAAGGCTTTCACATCACCTTTGTCAACACCGAGTTCAACCATCAACGCCTCCTCCGATCTCGAGGCCCCCACTCCCTTGACGGCCTCCCGCCGCTCAGATTTGAAACTATTCCTGATGGGTTGCCACCTCGAATTTCGTCAAACGTGCCACCGGTCACTTGCATAGTTTCAGACGGTGTAATGAGTTTCACTGTTGCCGCTGCTGAAGAACTTGGAATACCTGAAGTTTTATTTTGGACCACCAGTGCTTGTGGCTTCTATGGTTATGTTCAGTATCCCGAACTTGTTGAAAGGGGTATGACGCCACTAAAAGATGCAAGCTACGTATCAAATGGGTATTTGGATACACAGTTAGATTGGATTCCTGCTATGAAAGGCATACGTTTGAAGGATATGCCAAGTTTCGTTAGAACCACAGACCCAAATGATATCATGCTCAATTTCGTGTTGAACGAAATTAAGAGAGCTAAAAGAGCCTCTGCCATTATTTTGAACACATTCGACGATTTGGAACACGATGTTTTAGACACGCTTTCCTCCGTTTTACCACCAATTTACAGCATTGGTCCATTACAATTTCTCCATGACCAACTCAACGACAAGGATATAAAATTAATAGGATCGAATTTATGGAAGGAAGAGACAGAGTGCCTAGAATGGCTCGACACCAAAGAACCAAACTCAGTCGTCTACGTGAATTTTGGTAGCATTACCGTGTTGACACCAGACCAACTCGTCGAGTTCTCATGGGGACTAGCTAATAGCAAACAAACTTTTGTGTGGATAATAAGGCCAGATTTAGTCTCTGGTGACTCGGCTGTACTTCCAGCCGAGTTTTTGGAAGAGACTAAAGAAAGAGGGCTACTGGCAAGCTGGTGCCCACAAGAGCAAGTACTGAGTCACCCATCTATAGGTGGGTTTTTGACTCACAGTGGGTGGAATTCAACTCTGGAAAGTATATCGGGCGGCGTGCCGATGGTTTGCTGGCCCTTTTTTGCTGAGCAACAGACGAATTGTTGGTATTGTAGCACTCAATGGGGCATTGGGATGGAGATCGATAATAACGTTAAAAGAGATGAAGTAGATAGTCTAGTGAGTATGTTGATGGTTGGCGAGAAGGGGAAAGAGATGAAAAGAAGGGCCATGGATTGGAAGAGAAAGGCTGAAGATGCTACTAATTCAGGTGGGTCATCTTACCTGAATTTGGAGAAGATGATTAGTCAAGTGCTGCTTTCTCCAAAACATTAA

Network for GWHGAAZE020415

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0119

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00201.19	UDPGT	253	407	1.20E-26

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016758	molecular_function	transferase activity, transferring hexosyl groups

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.037
	SRR3591706	second leaf	0.024
	SRR3591707	mature leaf	0.109
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.232
	SRR3591710	White floral bud	7.565
	SRR3591711	White flower	4.959
	SRR3591712	Green floral bud	0.164
	SRR3591713	Yellow flower	7.330
SRP173429	SRR8316895	Juvenile bud stage	0.000
	SRR8316896	Juvenile bud stage	0.164
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.027
	SRR8316900	Third green stage	0.011
	SRR8316901	Third green stage	0.074
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.000
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.035
	SRR8316904	Silver flowering stage	0.200
	SRR8316905	Silver flowering stage	0.169
	SRR8316906	Gold flowering stage	2.846
	SRR8316907	Gold flowering stage	0.527
	SRR8316908	Gold flowering stage	1.981
SRP132670	SRR6706286	Control	0.067
	SRR6706287	Light intensity 50%	0.041
	SRR6706288	Light intensity 20%	0.012
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.033
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	0.000
	CNS0095595	Whole white alabastrum(diploid) 2	0.000
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.000
	CNS0095598	Silvery flower (diploied) 1	0.061
	CNS0095599	Silvery flower (diploied) 2	0.120
	CNS0095600	Silvery flower (diploied) 3	0.052
	CNS0095601	Golden flower (diploid) 1	0.029
	CNS0095602	Golden flower (diploid) 2	0.156
	CNS0095603	Golden flower (diploid) 3	0.098
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.014
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.000
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.000
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.016
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.000
	CNS0095610	Silvery flower (tetraploid) 1	0.040
	CNS0095611	Silvery flower (tetraploid) 2	0.018
	CNS0095612	Silvery flower (tetraploid) 3	0.139
	CNS0095613	Golden flower (tetraploid) 1	0.655
	CNS0095614	Golden flower (tetraploid) 2	0.437
	CNS0095615	Golden flower (tetraploid) 3	0.110
CRA001975	CRR073297	Stem 1	0.018
	CRR073298	Stem 2	0.010
	CRR073299	Stem 3	0.017
	CRR073300	Leaf 1	0.057
	CRR073301	Leaf 2	0.008
	CRR073302	Leaf 3	0.020
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.040
	CRR073305	Juvenile bud 3	0.072
	CRR073306	Third green 1	0.125
	CRR073307	Third green 2	0.331
	CRR073308	Third green 3	0.225
	CRR073309	Second white 1	1.495
	CRR073310	Second white 2	2.484
	CRR073311	Second white 3	2.703
	CRR073312	Silver flowering 1	6.365
	CRR073313	Silver flowering 2	5.293
	CRR073314	Silver flowering 3	4.428
	CRR073315	Gold flowering 1	0.022
	CRR073316	Gold flowering 2	0.040
	CRR073317	Gold flowering 3	0.577
	CRR073318	Tawny withering 1	3.921
	CRR073319	Tawny withering 2	12.454
	CRR073320	Tawny withering 3	0.147