Detail information of GWHGAAZE020476


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010650475.11.1582E-29PREDICTED: uncharacterized protein LOC100260062 isoform X2 [Vitis vinifera]
trEMBLtr|F6I3S4|F6I3S4_VITVI4E-30Putative uncharacterized protein {ECO:0000313|EMBL:CCB61592.1}
TAIR10AT1G54380.10.00002spliceosome protein-related

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene60712786074831-
GWHAAZE00000006mRNA60712786074831-
GWHAAZE00000006exon60734996074831-
GWHAAZE00000006exon60712786071577-
GWHAAZE00000006CDS60734996074831-
GWHAAZE00000006CDS60714896071577-
GWHAAZE00000006three_prime_UTR60712786071488-
Transcript Sequence

Network for GWHGAAZE020476

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K13130GEMIN2, SIP1 RNA transport map03013

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.684
SRR3591706second leaf1.235
SRR3591707mature leaf2.407
SRR3591708Shoot apex4.042
SRR3591709Stem2.026
SRR3591710White floral bud3.211
SRR3591711White flower8.247
SRR3591712Green floral bud4.658
SRR3591713Yellow flower2.619
SRP173429 SRR8316895Juvenile bud stage 3.092
SRR8316896Juvenile bud stage 4.048
SRR8316897Juvenile bud stage 2.009
SRR8316894Third green stage 1.673
SRR8316900Third green stage 4.920
SRR8316901Third green stage 3.683
SRR8316898Complete white stage 1.160
SRR8316899Complete white stage 5.515
SRR8316903Complete white stage 1.326
SRR8316902Silver flowering stage2.131
SRR8316904Silver flowering stage2.562
SRR8316905Silver flowering stage1.136
SRR8316906Gold flowering stage 3.825
SRR8316907Gold flowering stage 2.867
SRR8316908Gold flowering stage 5.166
SRP132670SRR6706286Control2.680
SRR6706287Light intensity 50%3.026
SRR6706288Light intensity 20%3.312
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.488
CNS0095593Slightly white alabastrum(diploid) 22.274
CNS0095594Slightly white alabastrum(diploid) 33.286
CNS0095595Whole white alabastrum(diploid) 22.627
CNS0095596Whole white alabastrum(diploid) 31.908
CNS0095597Whole white alabastrum(diploid) 41.961
CNS0095598Silvery flower (diploied) 14.745
CNS0095599Silvery flower (diploied) 22.035
CNS0095600Silvery flower (diploied) 33.581
CNS0095601Golden flower (diploid) 11.880
CNS0095602Golden flower (diploid) 23.215
CNS0095603Golden flower (diploid) 33.149
CNS0095604Slightly white alabastrum(tetraploid) 13.378
CNS0095605Slightly white alabastrum(tetraploid) 22.637
CNS0095606Slightly white alabastrum(tetraploid) 36.608
CNS0095607Whole white alabastrum(tetraploid) 11.998
CNS0095608Whole white alabastrum(tetraploid) 22.221
CNS0095609Whole white alabastrum(tetraploid) 33.383
CNS0095610Silvery flower (tetraploid) 14.635
CNS0095611Silvery flower (tetraploid) 23.398
CNS0095612Silvery flower (tetraploid) 32.949
CNS0095613Golden flower (tetraploid) 11.418
CNS0095614Golden flower (tetraploid) 22.839
CNS0095615Golden flower (tetraploid) 31.066
CRA001975CRR073297Stem 14.139
CRR073298Stem 22.949
CRR073299Stem 33.492
CRR073300Leaf 13.268
CRR073301Leaf 22.687
CRR073302Leaf 31.892
CRR073303Juvenile bud 12.097
CRR073304Juvenile bud 21.257
CRR073305Juvenile bud 33.459
CRR073306Third green 11.480
CRR073307Third green 20.409
CRR073308Third green 31.041
CRR073309Second white 12.062
CRR073310Second white 22.510
CRR073311Second white 32.201
CRR073312Silver flowering 11.826
CRR073313Silver flowering 22.018
CRR073314Silver flowering 31.710
CRR073315Gold flowering 12.897
CRR073316Gold flowering 23.983
CRR073317Gold flowering 32.744
CRR073318Tawny withering 14.144
CRR073319Tawny withering 23.310
CRR073320Tawny withering 33.289