Detail information of GWHGAAZE020549


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010265518.15.1204E-37PREDICTED: uncharacterized protein LOC104603240 [Nelumbo nucifera]
trEMBLtr|V4LG34|V4LG34_EUTSA9E-37Uncharacterized protein {ECO:0000313|EMBL:ESQ42679.1}
TAIR10AT5G57230.12E-30Thioredoxin superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene99993389999806-
GWHAAZE00000006mRNA99993389999806-
GWHAAZE00000006exon99993389999434-
GWHAAZE00000006exon99995519999670-
GWHAAZE00000006exon99997909999806-
GWHAAZE00000006CDS99997909999806-
GWHAAZE00000006CDS99995519999670-
GWHAAZE00000006CDS99993389999434-
Transcript Sequence

Network for GWHGAAZE020549

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0009


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf15.597
SRR3591706second leaf10.679
SRR3591707mature leaf11.033
SRR3591708Shoot apex14.780
SRR3591709Stem17.996
SRR3591710White floral bud13.235
SRR3591711White flower18.158
SRR3591712Green floral bud12.952
SRR3591713Yellow flower16.491
SRP173429 SRR8316895Juvenile bud stage 6.601
SRR8316896Juvenile bud stage 8.650
SRR8316897Juvenile bud stage 5.068
SRR8316894Third green stage 2.360
SRR8316900Third green stage 7.748
SRR8316901Third green stage 9.252
SRR8316898Complete white stage 4.856
SRR8316899Complete white stage 10.010
SRR8316903Complete white stage 3.586
SRR8316902Silver flowering stage4.096
SRR8316904Silver flowering stage8.041
SRR8316905Silver flowering stage2.473
SRR8316906Gold flowering stage 7.376
SRR8316907Gold flowering stage 7.273
SRR8316908Gold flowering stage 15.623
SRP132670SRR6706286Control5.608
SRR6706287Light intensity 50%7.020
SRR6706288Light intensity 20%7.059
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.884
CNS0095593Slightly white alabastrum(diploid) 25.907
CNS0095594Slightly white alabastrum(diploid) 38.944
CNS0095595Whole white alabastrum(diploid) 27.509
CNS0095596Whole white alabastrum(diploid) 35.414
CNS0095597Whole white alabastrum(diploid) 45.651
CNS0095598Silvery flower (diploied) 18.396
CNS0095599Silvery flower (diploied) 29.160
CNS0095600Silvery flower (diploied) 310.349
CNS0095601Golden flower (diploid) 17.914
CNS0095602Golden flower (diploid) 27.786
CNS0095603Golden flower (diploid) 37.717
CNS0095604Slightly white alabastrum(tetraploid) 116.806
CNS0095605Slightly white alabastrum(tetraploid) 213.097
CNS0095606Slightly white alabastrum(tetraploid) 315.134
CNS0095607Whole white alabastrum(tetraploid) 19.308
CNS0095608Whole white alabastrum(tetraploid) 210.543
CNS0095609Whole white alabastrum(tetraploid) 312.387
CNS0095610Silvery flower (tetraploid) 114.593
CNS0095611Silvery flower (tetraploid) 215.654
CNS0095612Silvery flower (tetraploid) 313.609
CNS0095613Golden flower (tetraploid) 110.717
CNS0095614Golden flower (tetraploid) 210.704
CNS0095615Golden flower (tetraploid) 312.369
CRA001975CRR073297Stem 12.941
CRR073298Stem 24.587
CRR073299Stem 36.390
CRR073300Leaf 16.765
CRR073301Leaf 23.794
CRR073302Leaf 34.099
CRR073303Juvenile bud 13.827
CRR073304Juvenile bud 25.038
CRR073305Juvenile bud 35.260
CRR073306Third green 11.889
CRR073307Third green 23.052
CRR073308Third green 33.044
CRR073309Second white 12.441
CRR073310Second white 23.635
CRR073311Second white 34.962
CRR073312Silver flowering 13.846
CRR073313Silver flowering 23.430
CRR073314Silver flowering 32.669
CRR073315Gold flowering 12.306
CRR073316Gold flowering 27.942
CRR073317Gold flowering 31.362
CRR073318Tawny withering 12.724
CRR073319Tawny withering 27.139
CRR073320Tawny withering 38.831