Gene detail

Detail information of GWHGAAZE020594

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	AHF22089.1	4.5364E-155	CYP79D33 [Maesa lanceolata]
COG	YP_006813313.1	0.000001	Cytochrome P450 monooxygenase
Swissprot	tr\|Q6J541\|C79D3_LOTJA	1E-136	Isoleucine N-monooxygenase 1
trEMBL	tr\|W0FG45\|W0FG45_POPTR	4E-142	Cytochrome P450 {ECO:0000313\|EMBL:AHF20912.1}
TAIR10	AT5G05260.1	4E-104	cytochrome p450 79a2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	11585319	11586763	-
GWHAAZE00000006	mRNA	11585319	11586763	-
GWHAAZE00000006	exon	11585319	11585420	-
GWHAAZE00000006	exon	11585572	11585844	-
GWHAAZE00000006	exon	11585939	11586763	-
GWHAAZE00000006	CDS	11585939	11586763	-
GWHAAZE00000006	CDS	11585572	11585844	-
GWHAAZE00000006	CDS	11585319	11585420	-

Transcript Sequence
>GWHTAAZE020618 ATGCAATGGCCTATTATCGGGAGCCTGCACGCGTTGTTTACATGTAAGCCCGTGTTTCGATGGATTCATAGGCTTATGCGTGAGATGAATACAGAAATCATTTGTATCCGGTTCTTGAACACCCATGTCATTGCTGTGTCAAGTGATGATTTGGCAAAAGAGTTCTTGAAGACACAAGACACCGTGTTTTCTTCAAGACCTATTTCTTTAACTTCTGAAATAATTAGTGGTGAACACCTGATGACTCTCCTTAGTCCCATGGGAGAGCAATGGAAAAAAATGAGGGGAATCCTTGCCACTGAAATCCTTTCCAAGAATAGACACAAGTGGCTTATGAACAAGAGAAACGAAGAGGCTGACCACTTAGTCCAGTATGTCTACAACAAAACTTGTAGCAGCATGATAGGGGGGATTGTCAACGTGAGGGTTACTGCTCAACATTATTGCGGTAATGTGATGAGAAAATTAATATTTGGTAAGCGATTCTTTGGAGCTGGGATGCAAGATGGAGGACCAGGAGCTGAAGAAGAAGAGCATATCAGCGCGCTCTTCACAATACTAAGGCACACGTTTTCCTTTTCTGTTTCTGATTACGTTGGGTTTTTACGTGGACGACTTGATTTAGATGGTCACCAAACTATCATTAGAAAGGCAGTTGAAAGTGTGAGGAAGTATCAAGATCCTCTAATAGATAAGAGAGCTCAACAATGGGCAAAAGGTGCCAAAACAGTGAAAGAAGACTTGCTTGATGTCATGCTATCTTTCCAAAAAGAAGACCGGGGCAAGACATCGTTATCCGTTGATGAGATCAAAGTCCAAATTATTGAAATGATGACGGCATCGATTGACAATCCATCTAATGCAGTCGAGTGGGCAATTGCAGATATGATAAATCAAACCACGACACTTCAAAAGGCAGTAGAAGAATTGGATAGAGTAGTAGGGACACATAGGTTGGTCCAAGAATCAGATTTGCCAGAGCTGAACTACATTAAGTCATGTGCAAAGGAGGCCTTTAGACTCCATCCCGCTATGCCTTTAATGTCCCGCATGTATCTGTGTCTGATACGACAATCACCGGCTACTCCATACCAAAAGTGGGCAAAGAGGATGTCCAGGAGTTATGTTAGGTTCGACAATGACAACAATGCTACTAGCAAGGCTTCTTCAATGCTTCACCTGGAGCACTCCACCTACTGA

Network for GWHGAAZE020594

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	3	353	3.90E-40

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K12153	CYP79A2	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		2-Oxocarboxylic acid metabolism	map01210
		Cyanoamino acid metabolism	map00460
		Glucosinolate biosynthesis	map00966

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.012
	SRR3591707	mature leaf	0.028
	SRR3591708	Shoot apex	0.001
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.274
	SRR3591711	White flower	0.801
	SRR3591712	Green floral bud	0.045
	SRR3591713	Yellow flower	64.657
SRP173429	SRR8316895	Juvenile bud stage	0.043
	SRR8316896	Juvenile bud stage	0.014
	SRR8316897	Juvenile bud stage	0.015
	SRR8316894	Third green stage	0.050
	SRR8316900	Third green stage	0.000
	SRR8316901	Third green stage	0.002
	SRR8316898	Complete white stage	0.186
	SRR8316899	Complete white stage	0.000
	SRR8316903	Complete white stage	0.023
	SRR8316902	Silver flowering stage	0.003
	SRR8316904	Silver flowering stage	0.059
	SRR8316905	Silver flowering stage	0.078
	SRR8316906	Gold flowering stage	5.071
	SRR8316907	Gold flowering stage	2.719
	SRR8316908	Gold flowering stage	1.631
SRP132670	SRR6706286	Control	0.106
	SRR6706287	Light intensity 50%	0.124
	SRR6706288	Light intensity 20%	0.039
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.097
	CNS0095593	Slightly white alabastrum(diploid) 2	0.005
	CNS0095594	Slightly white alabastrum(diploid) 3	0.035
	CNS0095595	Whole white alabastrum(diploid) 2	0.079
	CNS0095596	Whole white alabastrum(diploid) 3	0.064
	CNS0095597	Whole white alabastrum(diploid) 4	0.088
	CNS0095598	Silvery flower (diploied) 1	0.364
	CNS0095599	Silvery flower (diploied) 2	0.547
	CNS0095600	Silvery flower (diploied) 3	0.549
	CNS0095601	Golden flower (diploid) 1	2.330
	CNS0095602	Golden flower (diploid) 2	44.566
	CNS0095603	Golden flower (diploid) 3	44.734
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.169
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.084
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.172
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.114
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.016
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.000
	CNS0095610	Silvery flower (tetraploid) 1	11.361
	CNS0095611	Silvery flower (tetraploid) 2	13.049
	CNS0095612	Silvery flower (tetraploid) 3	26.291
	CNS0095613	Golden flower (tetraploid) 1	84.135
	CNS0095614	Golden flower (tetraploid) 2	124.114
	CNS0095615	Golden flower (tetraploid) 3	152.829
CRA001975	CRR073297	Stem 1	0.005
	CRR073298	Stem 2	0.010
	CRR073299	Stem 3	0.006
	CRR073300	Leaf 1	0.006
	CRR073301	Leaf 2	0.019
	CRR073302	Leaf 3	0.007
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.081
	CRR073307	Third green 2	0.114
	CRR073308	Third green 3	0.170
	CRR073309	Second white 1	4.034
	CRR073310	Second white 2	4.590
	CRR073311	Second white 3	6.183
	CRR073312	Silver flowering 1	31.696
	CRR073313	Silver flowering 2	30.347
	CRR073314	Silver flowering 3	29.755
	CRR073315	Gold flowering 1	0.457
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.035
	CRR073318	Tawny withering 1	0.303
	CRR073319	Tawny withering 2	0.035
	CRR073320	Tawny withering 3	0.339