Gene detail

Detail information of GWHGAAZE020601

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	AHF22089.1	0	CYP79D33 [Maesa lanceolata]
COG	YP_003950164.1	6E-22	cytochrome p450
Swissprot	tr\|Q6J541\|C79D3_LOTJA	2E-173	Isoleucine N-monooxygenase 1
trEMBL	tr\|A0A061H0F7\|A0A061H0F7_THECC	0	Cytochrome p450 79a2, putative {ECO:0000313\|EMBL:EOY34704.1}
TAIR10	AT4G39950.1	3E-133	cytochrome P450, family 79, subfamily B, polypeptide 2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000006	gene	12194853	12197451	+
GWHAAZE00000006	mRNA	12194853	12197451	+
GWHAAZE00000006	exon	12194853	12195225	+
GWHAAZE00000006	exon	12195295	12195599	+
GWHAAZE00000006	exon	12195688	12196304	+
GWHAAZE00000006	exon	12197403	12197451	+
GWHAAZE00000006	CDS	12194853	12195225	+
GWHAAZE00000006	CDS	12195295	12195599	+
GWHAAZE00000006	CDS	12195688	12196304	+
GWHAAZE00000006	CDS	12197403	12197451	+

Transcript Sequence
>GWHTAAZE020625 ATGCATAAGATGAATACGGAAATCATATGTATCCGCTTCCTAAACACCCATGTCATTGTTGTGTCTAGCGATGATTTGGCAAAAAAGTTCTTAAAGACACAAGACGCCGTGTTTTCTTCAAGACCTATTTCTTTAGCTTCTGAAATCACCAGTGGTGGATACATGACAACTGCCTTTAGTCCCATGGGAGAGCAATGGAAAAAAATGAGGAGAATCCTTGCCACTGAAATCCTTTCCAAGAATAGACACAAGTGGCTTCTGAATAAGAGAAACGAAGAGGCCGACTACTTAGTCCATCATGTCTACAACCAAGCATGTAGCACCTTGACTGGGGGGGTTGTCAATGTGAGGGTCATTACTCAGCATTATTGTGGAGCTGAAGAAGAAGAGCATATCAACGCGGTCTTCTCAATACTCAAGTACACATTTTCTTTTTGTGTTTCTGATTATGTTGGATTTTTACGTGGACGGTTTGATTTAGATGGTCAAGAAAAAAACATCAAAAAGGCAGTTGAAAGTGTGAGGAAGTATCAAGATCCTTTAATAGAGAAGAGAGCACAACAATGGGCGAAAGGAACCAAGACAGTGAAAGAAGACTTGCTTGATGTCATGATCTCTCTCCAGAGTGAAGCGGGCATGACTTTGTTGTCCGTTGATGAGATTAAAGCCCAAGTCATTGAAATGATGGTGGCATCAGTGGACAATCCATCGAATGCAGTTGAGTCGGCACTTGCAGAAATGATAAATCGAACTGAGACACTTCAAAGGGCAGTAGAAGAATTGGATAGAGTGGTAGGGGCACACAGGTTGGTCCAGGAATCAGATTTGCCAAAGCTGAACTACATTAAGTCATGTGTAAGGGAGGCCTTTAGACTCCATCCTTTTGTACCTTTTAATGTCCCGCATGTATCCATGTCTGATACGACAGTCGCTGGTTATTTCATACCAAAGGGTAGCCATGTGCTTTTGAGTCGATCAGGTCTTGGACGCAACCCAAAAATCTGGGATGACCCATTGACCTTTAATCCAGAGCGACACCTGAGGGACGATGGCTCTGAAGTGGTACTAACAGAGTCAGAGCTTCGACTTTTGTCTTTTAGTAGTGGGCGAAGAGGGTGCACAGGAGTGTTGTTGGGTTCAACAATGACAACAATGCTACTAGCGAGACTTCTTCAATGCTTCACCTGGAGTGCTCCACTTACCGAGTCATGCATTGACCTCAGTGAGTCATATGACAGTTTGGGTATGGCGAAACCTTTGCATGCACACGCCAGGCCGCGTTTGGGAGATAATTTGACAAGGAGTACCATATGTTCACAAGCACATACAACACTTAACTTTTAG

Network for GWHGAAZE020601

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	2	410	2.00E-68

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K12153	CYP79A2	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		2-Oxocarboxylic acid metabolism	map01210
		Cyanoamino acid metabolism	map00460
		Glucosinolate biosynthesis	map00966

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.067
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.964
	SRR3591711	White flower	2.384
	SRR3591712	Green floral bud	0.000
	SRR3591713	Yellow flower	4.364
SRP173429	SRR8316895	Juvenile bud stage	0.145
	SRR8316896	Juvenile bud stage	0.110
	SRR8316897	Juvenile bud stage	0.070
	SRR8316894	Third green stage	0.025
	SRR8316900	Third green stage	0.000
	SRR8316901	Third green stage	0.045
	SRR8316898	Complete white stage	0.418
	SRR8316899	Complete white stage	0.140
	SRR8316903	Complete white stage	0.041
	SRR8316902	Silver flowering stage	309.269
	SRR8316904	Silver flowering stage	375.130
	SRR8316905	Silver flowering stage	251.012
	SRR8316906	Gold flowering stage	977.967
	SRR8316907	Gold flowering stage	886.032
	SRR8316908	Gold flowering stage	526.378
SRP132670	SRR6706286	Control	0.000
	SRR6706287	Light intensity 50%	0.000
	SRR6706288	Light intensity 20%	0.000
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.034
	CNS0095593	Slightly white alabastrum(diploid) 2	0.240
	CNS0095594	Slightly white alabastrum(diploid) 3	0.151
	CNS0095595	Whole white alabastrum(diploid) 2	0.398
	CNS0095596	Whole white alabastrum(diploid) 3	0.144
	CNS0095597	Whole white alabastrum(diploid) 4	0.614
	CNS0095598	Silvery flower (diploied) 1	8.767
	CNS0095599	Silvery flower (diploied) 2	8.763
	CNS0095600	Silvery flower (diploied) 3	152.745
	CNS0095601	Golden flower (diploid) 1	45.699
	CNS0095602	Golden flower (diploid) 2	115.111
	CNS0095603	Golden flower (diploid) 3	114.191
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.212
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.219
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.091
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.253
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.214
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.144
	CNS0095610	Silvery flower (tetraploid) 1	140.728
	CNS0095611	Silvery flower (tetraploid) 2	184.600
	CNS0095612	Silvery flower (tetraploid) 3	2390.728
	CNS0095613	Golden flower (tetraploid) 1	421.366
	CNS0095614	Golden flower (tetraploid) 2	197.386
	CNS0095615	Golden flower (tetraploid) 3	380.427
CRA001975	CRR073297	Stem 1	3.137
	CRR073298	Stem 2	1.841
	CRR073299	Stem 3	2.563
	CRR073300	Leaf 1	1.608
	CRR073301	Leaf 2	1.983
	CRR073302	Leaf 3	3.588
	CRR073303	Juvenile bud 1	2.126
	CRR073304	Juvenile bud 2	1.610
	CRR073305	Juvenile bud 3	3.001
	CRR073306	Third green 1	1503.516
	CRR073307	Third green 2	813.040
	CRR073308	Third green 3	1079.455
	CRR073309	Second white 1	3308.655
	CRR073310	Second white 2	2887.255
	CRR073311	Second white 3	3603.128
	CRR073312	Silver flowering 1	3027.827
	CRR073313	Silver flowering 2	2498.271
	CRR073314	Silver flowering 3	1950.422
	CRR073315	Gold flowering 1	0.547
	CRR073316	Gold flowering 2	0.958
	CRR073317	Gold flowering 3	0.089
	CRR073318	Tawny withering 1	0.759
	CRR073319	Tawny withering 2	0.752
	CRR073320	Tawny withering 3	0.139