Detail information of GWHGAAZE020615


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAHF22089.10CYP79D33 [Maesa lanceolata]
COGYP_003950164.16E-24cytochrome p450
Swissprottr|Q9M7B8|C79D1_MANES0Valine N-monooxygenase 1
trEMBLtr|W0FG45|W0FG45_POPTR0Cytochrome P450 {ECO:0000313|EMBL:AHF20912.1}
TAIR10AT5G05260.11E-159cytochrome p450 79a2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene1274678212748564+
GWHAAZE00000006mRNA1274678212748564+
GWHAAZE00000006exon1274678212747777+
GWHAAZE00000006exon1274786912748564+
GWHAAZE00000006CDS1274678212747777+
GWHAAZE00000006CDS1274786912748564+
Transcript Sequence

Network for GWHGAAZE020615

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00067.23p450545254.50E-75
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12153CYP79A2 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
2-Oxocarboxylic acid metabolismmap01210
Cyanoamino acid metabolismmap00460
Glucosinolate biosynthesismap00966

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0005506molecular_functioniron ion binding
GO:0016705molecular_functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037molecular_functionheme binding

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE020615.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 30102030405060708090100110120Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.320
SRR3591707mature leaf0.149
SRR3591708Shoot apex0.043
SRR3591709Stem0.024
SRR3591710White floral bud0.157
SRR3591711White flower0.000
SRR3591712Green floral bud0.000
SRR3591713Yellow flower0.022
SRP173429 SRR8316895Juvenile bud stage 0.427
SRR8316896Juvenile bud stage 0.426
SRR8316897Juvenile bud stage 0.009
SRR8316894Third green stage 0.000
SRR8316900Third green stage 0.000
SRR8316901Third green stage 0.509
SRR8316898Complete white stage 14.234
SRR8316899Complete white stage 1.177
SRR8316903Complete white stage 16.812
SRR8316902Silver flowering stage7.824
SRR8316904Silver flowering stage15.271
SRR8316905Silver flowering stage8.944
SRR8316906Gold flowering stage 22.745
SRR8316907Gold flowering stage 26.027
SRR8316908Gold flowering stage 10.486
SRP132670SRR6706286Control1.311
SRR6706287Light intensity 50%2.697
SRR6706288Light intensity 20%0.663
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.045
CNS0095593Slightly white alabastrum(diploid) 20.024
CNS0095594Slightly white alabastrum(diploid) 30.000
CNS0095595Whole white alabastrum(diploid) 20.124
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 40.021
CNS0095598Silvery flower (diploied) 11.047
CNS0095599Silvery flower (diploied) 20.914
CNS0095600Silvery flower (diploied) 36.380
CNS0095601Golden flower (diploid) 12.638
CNS0095602Golden flower (diploid) 24.087
CNS0095603Golden flower (diploid) 33.148
CNS0095604Slightly white alabastrum(tetraploid) 10.068
CNS0095605Slightly white alabastrum(tetraploid) 20.056
CNS0095606Slightly white alabastrum(tetraploid) 30.881
CNS0095607Whole white alabastrum(tetraploid) 10.097
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.120
CNS0095610Silvery flower (tetraploid) 111.136
CNS0095611Silvery flower (tetraploid) 28.453
CNS0095612Silvery flower (tetraploid) 368.986
CNS0095613Golden flower (tetraploid) 130.058
CNS0095614Golden flower (tetraploid) 213.091
CNS0095615Golden flower (tetraploid) 321.429
CRA001975CRR073297Stem 11.441
CRR073298Stem 21.223
CRR073299Stem 30.932
CRR073300Leaf 10.708
CRR073301Leaf 20.403
CRR073302Leaf 30.580
CRR073303Juvenile bud 12.889
CRR073304Juvenile bud 250.213
CRR073305Juvenile bud 30.738
CRR073306Third green 183.226
CRR073307Third green 2107.796
CRR073308Third green 372.911
CRR073309Second white 118.040
CRR073310Second white 226.960
CRR073311Second white 333.462
CRR073312Silver flowering 116.639
CRR073313Silver flowering 29.131
CRR073314Silver flowering 311.929
CRR073315Gold flowering 116.699
CRR073316Gold flowering 212.661
CRR073317Gold flowering 311.565
CRR073318Tawny withering 10.201
CRR073319Tawny withering 20.798
CRR073320Tawny withering 31.184