Detail information of GWHGAAZE020763


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010251388.15.4216E-35PREDICTED: uncharacterized protein LOC104593327 [Nelumbo nucifera]
trEMBLtr|A0A058ZXG2|A0A058ZXG2_EUCGR2E-35Uncharacterized protein {ECO:0000313|EMBL:KCW46051.1}
TAIR10AT5G10460.13E-23Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000006gene2029042420299730+
GWHAAZE00000006mRNA2029042420299730+
GWHAAZE00000006exon2029042420290525+
GWHAAZE00000006exon2029949120299730+
GWHAAZE00000006CDS2029042420290525+
GWHAAZE00000006CDS2029949120299730+
Transcript Sequence

Network for GWHGAAZE020763

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0117


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE020763.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 300.511.522.533.544.555.5Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.074
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud0.276
SRR3591711White flower0.198
SRR3591712Green floral bud0.222
SRR3591713Yellow flower0.494
SRP173429 SRR8316895Juvenile bud stage 0.018
SRR8316896Juvenile bud stage 0.157
SRR8316897Juvenile bud stage 4.002
SRR8316894Third green stage 0.092
SRR8316900Third green stage 0.106
SRR8316901Third green stage 0.076
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.072
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.128
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.416
SRR8316907Gold flowering stage 0.445
SRR8316908Gold flowering stage 1.644
SRP132670SRR6706286Control0.000
SRR6706287Light intensity 50%0.000
SRR6706288Light intensity 20%0.007
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.175
CNS0095593Slightly white alabastrum(diploid) 20.000
CNS0095594Slightly white alabastrum(diploid) 30.014
CNS0095595Whole white alabastrum(diploid) 20.202
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 40.043
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.083
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.032
CNS0095603Golden flower (diploid) 30.043
CNS0095604Slightly white alabastrum(tetraploid) 14.816
CNS0095605Slightly white alabastrum(tetraploid) 23.682
CNS0095606Slightly white alabastrum(tetraploid) 34.237
CNS0095607Whole white alabastrum(tetraploid) 12.281
CNS0095608Whole white alabastrum(tetraploid) 23.789
CNS0095609Whole white alabastrum(tetraploid) 33.062
CNS0095610Silvery flower (tetraploid) 13.121
CNS0095611Silvery flower (tetraploid) 22.754
CNS0095612Silvery flower (tetraploid) 33.162
CNS0095613Golden flower (tetraploid) 13.291
CNS0095614Golden flower (tetraploid) 23.536
CNS0095615Golden flower (tetraploid) 31.792
CRA001975CRR073297Stem 10.032
CRR073298Stem 20.000
CRR073299Stem 30.165
CRR073300Leaf 10.053
CRR073301Leaf 20.015
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.036
CRR073304Juvenile bud 20.003
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.046
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.020
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.438
CRR073320Tawny withering 30.025